RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 FAM223BA6NKX1 122 aa8.79□□□□□ -1
RBM39-202ENST00000338163 LY6EQ16553 131 aa8.79□□□□□ -1
RBM39-202ENST00000338163 BRD3OSQ6XYD6 125 aa8.79□□□□□ -1
RBM39-202ENST00000338163 FAM223AQ8IWN6 122 aa8.79□□□□□ -1
RBM39-202ENST00000338163 DUX3Q96PT4 197 aa8.79□□□□□ -1
RBM39-202ENST00000338163 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
RBM39-202ENST00000338163 NPFFO15130 113 aa8.78□□□□□ -1
RBM39-202ENST00000338163 NXPH4O95158 308 aa8.78□□□□□ -1
RBM39-202ENST00000338163 HTN1P15515 57 aa8.78□□□□□ -1
RBM39-202ENST00000338163 HERV-K104P63124 156 aa8.78□□□□□ -1
RBM39-202ENST00000338163 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
RBM39-202ENST00000338163 KLK9Q9UKQ9 250 aa8.78□□□□□ -1
RBM39-202ENST00000338163 ZANQ9Y493 2812 aa8.78□□□□□ -1
RBM39-202ENST00000338163 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
RBM39-202ENST00000338163 NDUFA4O00483 81 aa8.78□□□□□ -1
RBM39-202ENST00000338163 IGHV3-30-3P0DP02 117 aa8.78□□□□□ -1
RBM39-202ENST00000338163 RPL32P62910 135 aaKnown RBP8.78□□□□□ -1
RBM39-202ENST00000338163 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
RBM39-202ENST00000338163 A8MZ25 164 aa8.78□□□□□ -1
RBM39-202ENST00000338163 FAM19A4Q96LR4 140 aa8.78□□□□□ -1
RBM39-202ENST00000338163 BPESC1Q9GZL8 116 aa8.78□□□□□ -1
RBM39-202ENST00000338163 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
RBM39-202ENST00000338163 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
RBM39-202ENST00000338163 M0QY20 66 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 COX6CP09669 75 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 CD28P10747 220 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 POM121L12Q8N7R1 296 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 MOB4Q9Y3A3 225 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 CUBNO60494 3623 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 PRRC2AP48634 2157 aaKnown RBP8.77□□□□□ -1.01
RBM39-202ENST00000338163 H7C423 109 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 LGALS9O00182 355 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
RBM39-202ENST00000338163 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 IGHV1-69P01742 117 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 DAND5Q8N907 189 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 TRBV30A0A0K0K1B3 111 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 KLLNB2CW77 178 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 RPL13AP40429 203 aaKnown RBP8.76□□□□□ -1.01
RBM39-202ENST00000338163 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 CHCHD5Q9BSY4 110 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 PDZD2O15018 2839 aa8.76□□□□□ -1.01
RBM39-202ENST00000338163 M0QXV9 152 aa8.75□□□□□ -1.01
RBM39-202ENST00000338163 NSUN5P1Q3KNT7 163 aa8.75□□□□□ -1.01
RBM39-202ENST00000338163 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
RBM39-202ENST00000338163 KLK9Q2XQG4 91 aa8.75□□□□□ -1.01
RBM39-202ENST00000338163 DEFB113Q30KQ7 82 aa8.75□□□□□ -1.01
RBM39-202ENST00000338163 APRG1Q8IVJ8 170 aa8.75□□□□□ -1.01
RBM39-202ENST00000338163 DAZ1Q9NQZ3 744 aaKnown RBP8.75□□□□□ -1.01
RBM39-202ENST00000338163 IGHV4-30-2A0A087WSY4 118 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 I3L3M4 83 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 RHOHQ15669 191 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 SPINK13Q1W4C9 94 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 ITPR3Q14573 2671 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 PIMREGQ9BSJ6 248 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 MYO9AB2RTY4 2548 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 CSPG4Q6UVK1 2322 aa8.74□□□□□ -1.01
RBM39-202ENST00000338163 TLN2Q9Y4G6 2542 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 IGHV3-16A0A0C4DH30 117 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 ID1P41134 155 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 C10orf105Q8TEF2 133 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 TEX15Q9BXT5 2789 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 Q6Q795 121 aa8.73□□□□□ -1.01
RBM39-202ENST00000338163 LITAFQ99732 161 aa8.72□□□□□ -1.01
RBM39-202ENST00000338163 FLNAP21333 2647 aaKnown RBP8.72□□□□□ -1.01
RBM39-202ENST00000338163 IGHV4-61A0A0C4DH41 118 aa8.72□□□□□ -1.01
RBM39-202ENST00000338163 BLCAPP62952 87 aa8.72□□□□□ -1.01
RBM39-202ENST00000338163 MAPK1IP1LQ8NDC0 245 aa8.72□□□□□ -1.01
RBM39-202ENST00000338163 C2CD3Q4AC94 2353 aa8.71□□□□□ -1.01
RBM39-202ENST00000338163 PROK1P58294 105 aa8.71□□□□□ -1.01
RBM39-202ENST00000338163 ACANP16112 2415 aa8.71□□□□□ -1.01
RBM39-202ENST00000338163 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.02
RBM39-202ENST00000338163 A0A0J9YX75 114 aa8.71□□□□□ -1.02
RBM39-202ENST00000338163 KNCNA6PVL3 124 aa8.71□□□□□ -1.02
RBM39-202ENST00000338163 H3BT86 120 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 MIAQ16674 131 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
RBM39-202ENST00000338163 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 DUX5Q96PT3 197 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 IGHV1OR15-1A0A075B7D0 117 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 LMO4P61968 165 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 C19orf54Q5BKX5 351 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 DCANP1Q8TF63 244 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 USMG5Q96IX5 58 aa8.7□□□□□ -1.02
RBM39-202ENST00000338163 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 FAM236AA0A1B0GUQ0 79 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 FAM236BA0A1B0GV22 79 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 H3BUX3 64 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 DSCR9P59020 149 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 FAM110AQ9BQ89 295 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 LST1O00453 97 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 TMEM61Q8N0U2 210 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 Q96MF0 132 aa8.69□□□□□ -1.02
RBM39-202ENST00000338163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
RBM39-202ENST00000338163 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
RBM39-202ENST00000338163 Q9UF83 564 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms