RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C1orf43Q9BWL3 253 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 KRTAP17-1Q9BYP8 105 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 RBX1P62877 108 aa18.26■□□□□ 0.51
ATPAF1-201ENST00000329231 PNRC1Q12796 327 aaPredicted RBP18.26■□□□□ 0.51
ATPAF1-201ENST00000329231 TRAV26-2A0A0B4J265 109 aa18.25■□□□□ 0.51
ATPAF1-201ENST00000329231 TMEM243Q9BU79 118 aa18.25■□□□□ 0.51
ATPAF1-201ENST00000329231 KRTAP4-5Q9BYR2 181 aa18.25■□□□□ 0.51
ATPAF1-201ENST00000329231 TMEM191AQ9H0A3 160 aa18.25■□□□□ 0.51
ATPAF1-201ENST00000329231 COTL1Q14019 142 aa18.23■□□□□ 0.51
ATPAF1-201ENST00000329231 MIAQ16674 131 aa18.23■□□□□ 0.51
ATPAF1-201ENST00000329231 PCLOQ9Y6V0 5065 aa18.22■□□□□ 0.51
ATPAF1-201ENST00000329231 PPP1R2P9O14990 202 aa18.22■□□□□ 0.51
ATPAF1-201ENST00000329231 XGP55808 180 aa18.22■□□□□ 0.51
ATPAF1-201ENST00000329231 PRR34Q9NV39 138 aa18.21■□□□□ 0.51
ATPAF1-201ENST00000329231 LINC00269Q8N2A0 174 aa18.2■□□□□ 0.5
ATPAF1-201ENST00000329231 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.19■□□□□ 0.5
ATPAF1-201ENST00000329231 AMTP48728 403 aa18.19■□□□□ 0.5
ATPAF1-201ENST00000329231 RPL39LQ96EH5 51 aaKnown RBP18.19■□□□□ 0.5
ATPAF1-201ENST00000329231 A0A1B0GUV1 79 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 A0A1B0GW15 77 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 TMEM218A2RU14 115 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 UBE2L6O14933 153 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 COMMD7Q86VX2 200 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 DEFB104AQ8WTQ1 72 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 RNF185Q96GF1 192 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 TMEM70Q9BUB7 260 aa18.18■□□□□ 0.5
ATPAF1-201ENST00000329231 MT-ND4LP03901 98 aa18.17■□□□□ 0.5
ATPAF1-201ENST00000329231 RAB4AP20338 218 aa18.17■□□□□ 0.5
ATPAF1-201ENST00000329231 ANAPC16Q96DE5 110 aa18.17■□□□□ 0.5
ATPAF1-201ENST00000329231 CLPSL2Q6UWE3 100 aa18.16■□□□□ 0.5
ATPAF1-201ENST00000329231 AMN1Q8IY45 258 aa18.16■□□□□ 0.5
ATPAF1-201ENST00000329231 F8W036 122 aa18.15■□□□□ 0.5
ATPAF1-201ENST00000329231 ADCYAP1P18509 176 aa18.15■□□□□ 0.5
ATPAF1-201ENST00000329231 C14orf177Q52M58 125 aa18.15■□□□□ 0.5
ATPAF1-201ENST00000329231 MRAP2Q96G30 205 aa18.15■□□□□ 0.5
ATPAF1-201ENST00000329231 LINC00862A6NCI5 91 aa18.14■□□□□ 0.49
ATPAF1-201ENST00000329231 SDHAF1A6NFY7 115 aa18.14■□□□□ 0.49
ATPAF1-201ENST00000329231 NCR2O95944 276 aa18.14■□□□□ 0.49
ATPAF1-201ENST00000329231 CAMPP49913 170 aa18.14■□□□□ 0.49
ATPAF1-201ENST00000329231 REG3AQ06141 175 aa18.14■□□□□ 0.49
ATPAF1-201ENST00000329231 C20orf203Q8NBC4 194 aa18.14■□□□□ 0.49
ATPAF1-201ENST00000329231 HLA-DQA1P01909 254 aa18.13■□□□□ 0.49
ATPAF1-201ENST00000329231 IGLV4-60A0A075B6I1 120 aa18.12■□□□□ 0.49
ATPAF1-201ENST00000329231 TRBV6-5A0A0K0K1A5 114 aa18.12■□□□□ 0.49
ATPAF1-201ENST00000329231 S100A8P05109 93 aa18.12■□□□□ 0.49
ATPAF1-201ENST00000329231 MRPL54Q6P161 138 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-201ENST00000329231 GAS8-AS1O95177 125 aa18.11■□□□□ 0.49
ATPAF1-201ENST00000329231 HBBP68871 147 aa18.11■□□□□ 0.49
ATPAF1-201ENST00000329231 SEC11CQ9BY50 192 aa18.11■□□□□ 0.49
ATPAF1-201ENST00000329231 A0A1B0GXF2 115 aa18.1■□□□□ 0.49
ATPAF1-201ENST00000329231 FAM104BQ5XKR9 115 aa18.1■□□□□ 0.49
ATPAF1-201ENST00000329231 ST20Q9HBF5 79 aa18.1■□□□□ 0.49
ATPAF1-201ENST00000329231 TRAV8-4A0A0B4J246 113 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 EPM2AB3EWF7 344 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 I3L3M4 83 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 APCSP02743 223 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 PMCHP20382 165 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 ATP5L2Q7Z4Y8 100 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 ABCA13Q86UQ4 5058 aa18.09■□□□□ 0.49
ATPAF1-201ENST00000329231 USP17L23D6RBM5 183 aa18.08■□□□□ 0.48
ATPAF1-201ENST00000329231 H7C423 109 aa18.07■□□□□ 0.48
ATPAF1-201ENST00000329231 RPS10P46783 165 aaKnown RBP18.07■□□□□ 0.48
ATPAF1-201ENST00000329231 KRTAP26-1Q6PEX3 210 aa18.07■□□□□ 0.48
ATPAF1-201ENST00000329231 FAM30AQ9NZY2 134 aa18.07■□□□□ 0.48
ATPAF1-201ENST00000329231 IGLV10-54A0A075B6I4 117 aa18.06■□□□□ 0.48
ATPAF1-201ENST00000329231 PPP1R17O96001 155 aa18.06■□□□□ 0.48
ATPAF1-201ENST00000329231 MRPL51Q4U2R6 128 aaKnown RBP18.06■□□□□ 0.48
ATPAF1-201ENST00000329231 AMMECR1LQ6DCA0 310 aa18.06■□□□□ 0.48
ATPAF1-201ENST00000329231 SMKR1H3BMG3 65 aa18.05■□□□□ 0.48
ATPAF1-201ENST00000329231 HAMPP81172 84 aa18.05■□□□□ 0.48
ATPAF1-201ENST00000329231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 IGKV2-29A2NJV5 120 aaPredicted RBP18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 POLR2KP53803 58 aaKnown RBP18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 LINC01620Q4KN68 170 aa18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 Q6ZSA8 131 aa18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 NRACQ8N912 160 aa18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 CTDSP1Q9GZU7 261 aa18.03■□□□□ 0.48
ATPAF1-201ENST00000329231 SMR3BP02814 79 aaPredicted RBP18.02■□□□□ 0.48
ATPAF1-201ENST00000329231 C10orf91Q5T1B1 145 aa18.02■□□□□ 0.48
ATPAF1-201ENST00000329231 RNASEKQ6P5S7 137 aaKnown RBP18.02■□□□□ 0.48
ATPAF1-201ENST00000329231 IMMP2LQ96T52 175 aa18.02■□□□□ 0.48
ATPAF1-201ENST00000329231 CKS2P33552 79 aa18.01■□□□□ 0.47
ATPAF1-201ENST00000329231 Q5VSD8 79 aa18.01■□□□□ 0.47
ATPAF1-201ENST00000329231 TRBV27A0A0K0K1C4 114 aa18■□□□□ 0.47
ATPAF1-201ENST00000329231 TSHBP01222 138 aa18■□□□□ 0.47
ATPAF1-201ENST00000329231 FGF6P10767 208 aa18■□□□□ 0.47
ATPAF1-201ENST00000329231 BTF3L4Q96K17 158 aa18■□□□□ 0.47
ATPAF1-201ENST00000329231 TMEM242Q9NWH2 141 aa18■□□□□ 0.47
ATPAF1-201ENST00000329231 PRSS1P07477 247 aa17.99■□□□□ 0.47
ATPAF1-201ENST00000329231 ZNF25P17030 456 aaPredicted RBP17.99■□□□□ 0.47
ATPAF1-201ENST00000329231 SUMO2P61956 95 aaKnown RBP17.99■□□□□ 0.47
ATPAF1-201ENST00000329231 CLRN3Q8NCR9 226 aa17.99■□□□□ 0.47
ATPAF1-201ENST00000329231 CARHSP1Q9Y2V2 147 aaKnown RBP17.99■□□□□ 0.47
ATPAF1-201ENST00000329231 VCYO14598 125 aa17.98■□□□□ 0.47
ATPAF1-201ENST00000329231 ESDP10768 282 aa17.98■□□□□ 0.47
ATPAF1-201ENST00000329231 FAM229AH3BQW9 127 aa17.97■□□□□ 0.47
ATPAF1-201ENST00000329231 DGAT2L7PQ6IED9 249 aa17.97■□□□□ 0.47
ATPAF1-201ENST00000329231 TRBV24-1A0A075B6N3 115 aa17.96■□□□□ 0.47
ATPAF1-201ENST00000329231 IGKV3OR2-268A0A0C4DH90 116 aa17.96■□□□□ 0.47
ATPAF1-201ENST00000329231 D6R8Y8 96 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms