RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TGFAP01135 160 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 ANKRD29Q8N6D5 301 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 RAX2Q96IS3 184 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 LINC00467Q9BRT7 94 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 CHCHD7Q9BUK0 85 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 SPANXA1Q9NS26 97 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 POLQO75417 2590 aa6.34□□□□□ -1.4
CLK1-201ENST00000321356 PRRC2AP48634 2157 aaKnown RBP6.33□□□□□ -1.4
CLK1-201ENST00000321356 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 IGHV3-73A0A0B4J1V6 119 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 IGHV1-58A0A0C4DH39 117 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 A0A1B0GV72 72 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 TINCRA0A1B0GVN0 87 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 SLC25A20O43772 301 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 SLURP1P55000 103 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 ZNF415Q09FC8 603 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
CLK1-201ENST00000321356 Q6ZSN1 163 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 Q6ZUT4 128 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 SPXQ9BT56 116 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 Q9UF83 564 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
CLK1-201ENST00000321356 MYO9AB2RTY4 2548 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 XGP55808 180 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 BEAN1Q3B7T3 259 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 Q8N2B8 174 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 C11orf72Q8NBR9 251 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 DUX3Q96PT4 197 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 ACACBO00763 2458 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 C9JAW5 83 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 IGHV3-53P01767 116 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 PRM2P04554 102 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 HTN1P15515 57 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 DEFB136Q30KP8 78 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 C18orf65Q6ZTR6 163 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 TMEM61Q8N0U2 210 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 RNF183Q96D59 192 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 NDUFA12Q9UI09 145 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 CR1P17927 2039 aa6.32□□□□□ -1.4
CLK1-201ENST00000321356 ADARB2-AS1A8MUL3 147 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 MT-ATP8P03928 68 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 MIAQ16674 131 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
CLK1-201ENST00000321356 ADAMTSL4-AS1Q5T5F5 129 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 MAPK1IP1LQ8NDC0 245 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 TEX15Q9BXT5 2789 aa6.31□□□□□ -1.4
CLK1-201ENST00000321356 LRRK2Q5S007 2527 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 H7C2G1 150 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 ATXN8Q156A1 80 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 LINC01620Q4KN68 170 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 ZFAND6Q6FIF0 208 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 BEX4Q9NWD9 120 aaPredicted RBP6.3□□□□□ -1.4
CLK1-201ENST00000321356 PEMTQ9UBM1 199 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 UBR5O95071 2799 aaPredicted RBP6.3□□□□□ -1.4
CLK1-201ENST00000321356 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 TMEM262E9PQX1 116 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 RS1O15537 224 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 TRIAP1O43715 76 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 TIMM17BO60830 172 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 CKS1BP61024 79 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 C4orf3Q8WVX3 66 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
CLK1-201ENST00000321356 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.29□□□□□ -1.4
CLK1-201ENST00000321356 IGKV2-29A2NJV5 120 aaPredicted RBP6.29□□□□□ -1.4
CLK1-201ENST00000321356 Q1RN00 199 aa6.29□□□□□ -1.4
CLK1-201ENST00000321356 PTPN13Q12923 2485 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 A8MZ25 164 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 INSP01308 110 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 PRSS2P07478 247 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 RPL13AP40429 203 aaKnown RBP6.28□□□□□ -1.4
CLK1-201ENST00000321356 TIRAPP58753 221 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 DEFB114Q30KQ6 69 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 CHD6Q8TD26 2715 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 NDUFA1O15239 70 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 IFITM1P13164 125 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 LINC01587Q99440 93 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 YAE1D1Q9NRH1 226 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
CLK1-201ENST00000321356 FAM208BQ5VWN6 2430 aa6.27□□□□□ -1.4
CLK1-201ENST00000321356 IGHV3-38A0A0C4DH36 116 aa6.27□□□□□ -1.41
CLK1-201ENST00000321356 IGLV5-39A0A0G2JS06 123 aa6.27□□□□□ -1.41
CLK1-201ENST00000321356 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.27□□□□□ -1.41
CLK1-201ENST00000321356 NTN5Q8WTR8 489 aaPredicted RBP6.27□□□□□ -1.41
CLK1-201ENST00000321356 GEMIN7Q9H840 131 aaKnown RBP6.27□□□□□ -1.41
CLK1-201ENST00000321356 NAV2Q8IVL1 2488 aa6.27□□□□□ -1.41
CLK1-201ENST00000321356 IGHV3OR16-12A0A075B7B8 117 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms