RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 POLR2KP53803 58 aaKnown RBP4.56□□□□□ -1.68
PRKDC-201ENST00000314191 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 GTSF1LQ9H1H1 148 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 C9orf85Q96MD7 179 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 HILS1P60008 231 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 LAMA3Q16787 3333 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 CFAP126Q5VTH2 177 aa4.56□□□□□ -1.68
PRKDC-201ENST00000314191 NDUFA11Q86Y39 141 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 LINC00467Q9BRT7 94 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 TRBV20-1A0A075B6N2 111 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 RNASE8Q8TDE3 154 aaKnown RBP4.55□□□□□ -1.68
PRKDC-201ENST00000314191 A8MZ25 164 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 MRAPQ8TCY5 172 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 PLA2G2AP14555 144 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 TRBV6-5A0A0K0K1A5 114 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 TMEM126AQ9H061 195 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 RS1O15537 224 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 IGHV3-30-3P0DP02 117 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 OVOL2Q9BRP0 275 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 ANKHD1Q8IWZ3 2542 aaKnown RBP4.55□□□□□ -1.68
PRKDC-201ENST00000314191 BRI3O95415 125 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 DAZ2Q13117 558 aaKnown RBP4.55□□□□□ -1.68
PRKDC-201ENST00000314191 C2orf91Q6ZV80 131 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 DAZ4Q86SG3 579 aaKnown RBP4.55□□□□□ -1.68
PRKDC-201ENST00000314191 SLC25A29Q8N8R3 303 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 DAZ3Q9NR90 486 aaKnown RBP4.55□□□□□ -1.68
PRKDC-201ENST00000314191 HHLA3Q9XRX5 114 aa4.55□□□□□ -1.68
PRKDC-201ENST00000314191 TEX48A0A1B0GUV7 120 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 CDKN2A-AS1Q9UH64 79 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 TSHBP01222 138 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 NTN5Q8WTR8 489 aaPredicted RBP4.54□□□□□ -1.68
PRKDC-201ENST00000314191 TRBV27A0A0K0K1C4 114 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 IFITM1P13164 125 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 TMEM258P61165 79 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 ZNF22P17026 224 aaPredicted RBP4.54□□□□□ -1.68
PRKDC-201ENST00000314191 TRBV10-1A0A0K0K1A3 114 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 SPART-AS1P0CW21 52 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 WFDC2Q14508 124 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 ZNF580Q9UK33 172 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 ZNF561-AS1K7EIQ3 104 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 SLC25A20O43772 301 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 TRAV4A0A0B4J268 109 aa4.54□□□□□ -1.68
PRKDC-201ENST00000314191 F8W1H4 67 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 PRO0255Q9UI72 69 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 LOC100131303A0A0U1RQF7 123 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 C1orf158Q8N1D5 194 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 EDA2RQ9HAV5 297 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 CARD19Q96LW7 228 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 IGHV3-30P01768 117 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 IGHV3-33P01772 117 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 IGHV3-30-5P0DP03 117 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 INSL3P51460 131 aa4.53□□□□□ -1.68
PRKDC-201ENST00000314191 MRPL23Q16540 153 aaKnown RBP4.53□□□□□ -1.68
PRKDC-201ENST00000314191 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 C9orf153Q5TBE3 101 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 TMEM223A0PJW6 202 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 CPAMD8Q8IZJ3 1885 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 FAM222AQ5U5X8 452 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 NFE4Q86UQ8 179 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 TRACP01848 142 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 COX7B2Q8TF08 81 aa4.52□□□□□ -1.69
PRKDC-201ENST00000314191 TM2D2Q9BX73 214 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 J3KT08 172 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 RPL32P62910 135 aaKnown RBP4.51□□□□□ -1.69
PRKDC-201ENST00000314191 HERV-K104P63124 156 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 ICOSQ9Y6W8 199 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 Q9HAA7 133 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 UBE2DNLQ8IWF7 75 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 ZMAT4Q9H898 229 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 PTH2Q96A98 100 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 UBE2D4Q9Y2X8 147 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 IGLV2-18A0A075B6J9 118 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.51□□□□□ -1.69
PRKDC-201ENST00000314191 PRSS47A8MTI9 375 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 LINC01620Q4KN68 170 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 MIR7-3HGQ8N6C7 128 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 TINCRA0A1B0GVN0 87 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 IGIPA6NJ69 53 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
PRKDC-201ENST00000314191 C1orf43Q9BWL3 253 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
PRKDC-201ENST00000314191 MKI67P46013 3256 aaKnown RBP4.5□□□□□ -1.69
PRKDC-201ENST00000314191 PPDPFLQ8WWR9 84 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 IGKV2D-24A0A075B6R9 120 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 PYGO1Q9Y3Y4 419 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 TRBV6-4A0A1B0GX49 114 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 DNAH12Q6ZR08 3092 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 SPANXB1Q9NS25 103 aaPredicted RBP4.5□□□□□ -1.69
PRKDC-201ENST00000314191 TRAV26-1A0A087WT03 109 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 SND1-IT1Q9HBX3 110 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
PRKDC-201ENST00000314191 FAM110AQ9BQ89 295 aa4.5□□□□□ -1.69
PRKDC-201ENST00000314191 COX7A2LO14548 114 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 LINC00269Q8N2A0 174 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 IGLV1-51P01701 117 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms