RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 HRCT1Q6UXD1 115 aa8.04□□□□□ -1.12
MUC4-201ENST00000308466 UBE2WQ96B02 151 aa8.04□□□□□ -1.12
MUC4-201ENST00000308466 LINC01619G3V211 115 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 HERVK_113P63121 156 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 NRACQ8N912 160 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 FASNP49327 2511 aaKnown RBP8.03□□□□□ -1.12
MUC4-201ENST00000308466 TRGV1A0A0A0MS02 117 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 COX6CP09669 75 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 FHL3Q13643 280 aa8.03□□□□□ -1.12
MUC4-201ENST00000308466 A0A0J9YX75 114 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 ZNF415Q09FC8 603 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 ATP6V0E2Q8NHE4 81 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 HIGD1BQ9P298 99 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 USP24Q9UPU5 2620 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 COX8CQ7Z4L0 72 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 BAALCQ8WXS3 180 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 CARD19Q96LW7 228 aa8.02□□□□□ -1.13
MUC4-201ENST00000308466 OPRPNQ99935 248 aaPredicted RBP8.02□□□□□ -1.13
MUC4-201ENST00000308466 RNASE3P12724 160 aaKnown RBP8.01□□□□□ -1.13
MUC4-201ENST00000308466 NSUN5P1Q3KNT7 163 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 TRAV8-3A0A0A6YYJ7 113 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 TRAV25A0A0B4J276 109 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 I3L3M4 83 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 RPL35AP18077 110 aaKnown RBP8.01□□□□□ -1.13
MUC4-201ENST00000308466 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
MUC4-201ENST00000308466 TMEM61Q8N0U2 210 aa8□□□□□ -1.13
MUC4-201ENST00000308466 IGLV1-40P01703 118 aa8□□□□□ -1.13
MUC4-201ENST00000308466 PRM2P04554 102 aa8□□□□□ -1.13
MUC4-201ENST00000308466 NHLRC4P0CG21 123 aaPredicted RBP8□□□□□ -1.13
MUC4-201ENST00000308466 C11orf86A6NJI1 115 aa8□□□□□ -1.13
MUC4-201ENST00000308466 UBE2L6O14933 153 aa8□□□□□ -1.13
MUC4-201ENST00000308466 PSMB8P28062 276 aa8□□□□□ -1.13
MUC4-201ENST00000308466 SPANXA1Q9NS26 97 aa8□□□□□ -1.13
MUC4-201ENST00000308466 TMEM141Q96I45 108 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 K7EQG2 157 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 INSP01308 110 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 SMCPP49901 116 aaPredicted RBP7.99□□□□□ -1.13
MUC4-201ENST00000308466 TAL2Q16559 108 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 CFHR3Q02985 330 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 C18orf65Q6ZTR6 163 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 DNAJC30Q96LL9 226 aa7.99□□□□□ -1.13
MUC4-201ENST00000308466 A0A0J9YXV3 536 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 P0DMU3 169 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 FAM231AP0DMU4 169 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 FAM231CP0DMU5 169 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 KRTAP10-9P60411 292 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 PRO1854Q9UHT4 67 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 HHLA3Q9XRX5 114 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 J3QQQ9 107 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 TRACP01848 142 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 PF4P02776 101 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 ATXN8Q156A1 80 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 CRYBG3Q68DQ2 2970 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 A0A0U1RQV1 116 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 MED14OSP0DP75 135 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 HIST2H2BCQ6DN03 193 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 DCANP1Q8TF63 244 aa7.98□□□□□ -1.13
MUC4-201ENST00000308466 ZNF625Q96I27 306 aaPredicted RBP7.98□□□□□ -1.13
MUC4-201ENST00000308466 C19orf54Q5BKX5 351 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 TRAV12-1A0A0B4J245 112 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 hADV29S1A0JD25 119 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 ZNRF2Q8NHG8 242 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 TRAV13-1A0A0B4J241 112 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 TIMM21Q9BVV7 248 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 PRO0461Q9UI25 63 aa7.97□□□□□ -1.13
MUC4-201ENST00000308466 IGHV4-4A0A075B6R2 117 aa7.96□□□□□ -1.13
MUC4-201ENST00000308466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.96□□□□□ -1.13
MUC4-201ENST00000308466 IGKV2-29A2NJV5 120 aaPredicted RBP7.96□□□□□ -1.13
MUC4-201ENST00000308466 IGHV4-31P0DP07 118 aa7.96□□□□□ -1.13
MUC4-201ENST00000308466 CIRBPQ14011 172 aaKnown RBP7.96□□□□□ -1.13
MUC4-201ENST00000308466 NDUFA7O95182 113 aa7.96□□□□□ -1.14
MUC4-201ENST00000308466 CEMP1Q6PRD7 247 aaPredicted RBP7.96□□□□□ -1.14
MUC4-201ENST00000308466 DCHS2Q6V1P9 2916 aa7.96□□□□□ -1.14
MUC4-201ENST00000308466 BSNQ9UPA5 3926 aa7.96□□□□□ -1.14
MUC4-201ENST00000308466 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
MUC4-201ENST00000308466 KLLNB2CW77 178 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 M0R2P5 195 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 CRIP2P52943 208 aaPredicted RBP7.95□□□□□ -1.14
MUC4-201ENST00000308466 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
MUC4-201ENST00000308466 Q6YL49 198 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 PLEKHB2Q96CS7 222 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 PSMG3-AS1Q96PY0 264 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 TRGV4A0A0C4DH28 118 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 PROK1P58294 105 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 RPL36AP83881 106 aaKnown RBP7.95□□□□□ -1.14
MUC4-201ENST00000308466 RPL36ALQ969Q0 106 aaKnown RBP7.95□□□□□ -1.14
MUC4-201ENST00000308466 SOCS3O14543 225 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
MUC4-201ENST00000308466 IGLV2-18A0A075B6J9 118 aa7.94□□□□□ -1.14
MUC4-201ENST00000308466 CCL24O00175 119 aa7.94□□□□□ -1.14
MUC4-201ENST00000308466 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
MUC4-201ENST00000308466 RNF152Q8N8N0 203 aa7.94□□□□□ -1.14
MUC4-201ENST00000308466 UTP20O75691 2785 aaKnown RBP7.93□□□□□ -1.14
MUC4-201ENST00000308466 TMEM89A2RUT3 159 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms