RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 DEFB135Q30KP9 77 aa18.28■□□□□ 0.52
SDCCAG3-201ENST00000298537 TTTY13Q9BZ97 58 aa18.28■□□□□ 0.52
SDCCAG3-201ENST00000298537 TRGV2A0A075B6R0 118 aa18.27■□□□□ 0.52
SDCCAG3-201ENST00000298537 TRAV4A0A0B4J268 109 aa18.27■□□□□ 0.52
SDCCAG3-201ENST00000298537 C20orf203Q8NBC4 194 aa18.27■□□□□ 0.52
SDCCAG3-201ENST00000298537 OVOL2Q9BRP0 275 aa18.27■□□□□ 0.52
SDCCAG3-201ENST00000298537 CHTOPQ9Y3Y2 248 aaKnown RBP18.27■□□□□ 0.52
SDCCAG3-201ENST00000298537 RHOHQ15669 191 aa18.27■□□□□ 0.51
SDCCAG3-201ENST00000298537 SLC25A29Q8N8R3 303 aa18.27■□□□□ 0.51
SDCCAG3-201ENST00000298537 BATFQ16520 125 aa18.26■□□□□ 0.51
SDCCAG3-201ENST00000298537 PCP2Q8IVA1 136 aa18.26■□□□□ 0.51
SDCCAG3-201ENST00000298537 ZNRF2Q8NHG8 242 aa18.26■□□□□ 0.51
SDCCAG3-201ENST00000298537 TRAV12-1A0A0B4J245 112 aa18.26■□□□□ 0.51
SDCCAG3-201ENST00000298537 SLC25A34Q6PIV7 304 aa18.26■□□□□ 0.51
SDCCAG3-201ENST00000298537 CEMP1Q6PRD7 247 aaPredicted RBP18.26■□□□□ 0.51
SDCCAG3-201ENST00000298537 FGF6P10767 208 aa18.25■□□□□ 0.51
SDCCAG3-201ENST00000298537 NMUP48645 174 aa18.25■□□□□ 0.51
SDCCAG3-201ENST00000298537 F8VRH5 84 aa18.24■□□□□ 0.51
SDCCAG3-201ENST00000298537 DEFB4AO15263 64 aa18.24■□□□□ 0.51
SDCCAG3-201ENST00000298537 WIPF1O43516 503 aa18.24■□□□□ 0.51
SDCCAG3-201ENST00000298537 COX8AP10176 69 aa18.24■□□□□ 0.51
SDCCAG3-201ENST00000298537 LOC100131303A0A0U1RQF7 123 aa18.23■□□□□ 0.51
SDCCAG3-201ENST00000298537 KRTAP10-11P60412 298 aa18.23■□□□□ 0.51
SDCCAG3-201ENST00000298537 DEFB130BP0DP73 79 aa18.22■□□□□ 0.51
SDCCAG3-201ENST00000298537 DEFB130AP0DP74 79 aa18.22■□□□□ 0.51
SDCCAG3-201ENST00000298537 CHCHD7Q9BUK0 85 aa18.22■□□□□ 0.51
SDCCAG3-201ENST00000298537 K7EQD1 137 aa18.22■□□□□ 0.51
SDCCAG3-201ENST00000298537 IGHV4-30-4P0DP06 118 aa18.22■□□□□ 0.51
SDCCAG3-201ENST00000298537 TIMM17AQ99595 171 aa18.22■□□□□ 0.51
SDCCAG3-201ENST00000298537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.21■□□□□ 0.51
SDCCAG3-201ENST00000298537 IGKV2-29A2NJV5 120 aaPredicted RBP18.21■□□□□ 0.51
SDCCAG3-201ENST00000298537 FAM104AQ969W3 186 aa18.21■□□□□ 0.51
SDCCAG3-201ENST00000298537 GAGE12JA6NER3 117 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 GAGE4Q13068 117 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 GAGE5Q13069 117 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 GAGE13Q4V321 117 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 C2orf91Q6ZV80 131 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 DNAJC30Q96LL9 226 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 CST9LQ9H4G1 147 aa18.2■□□□□ 0.5
SDCCAG3-201ENST00000298537 IGLV4-69A0A075B6H9 119 aa18.19■□□□□ 0.5
SDCCAG3-201ENST00000298537 HINT1P49773 126 aaPredicted RBP18.19■□□□□ 0.5
SDCCAG3-201ENST00000298537 RNASE13Q5GAN3 156 aaKnown RBP18.19■□□□□ 0.5
SDCCAG3-201ENST00000298537 TRBV7-3A0A075B6L6 115 aa18.18■□□□□ 0.5
SDCCAG3-201ENST00000298537 C12orf54Q6X4T0 127 aa18.18■□□□□ 0.5
SDCCAG3-201ENST00000298537 TMEM141Q96I45 108 aa18.18■□□□□ 0.5
SDCCAG3-201ENST00000298537 MRPS16Q9Y3D3 137 aaKnown RBP18.18■□□□□ 0.5
SDCCAG3-201ENST00000298537 PMVKQ15126 192 aa18.18■□□□□ 0.5
SDCCAG3-201ENST00000298537 MRPL52Q86TS9 123 aaKnown RBP18.18■□□□□ 0.5
SDCCAG3-201ENST00000298537 PLNP26678 52 aa18.17■□□□□ 0.5
SDCCAG3-201ENST00000298537 IGLV4-3A0A075B6K6 122 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 C11orf86A6NJI1 115 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 FHL2Q14192 279 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 BOD1L2Q8IYS8 172 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 SHISA2Q6UWI4 295 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 OR11H2Q8NH07 326 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 KIR2DL5BQ8NHK3 375 aa18.16■□□□□ 0.5
SDCCAG3-201ENST00000298537 COTL1Q14019 142 aa18.15■□□□□ 0.5
SDCCAG3-201ENST00000298537 TRGV4A0A0C4DH28 118 aa18.15■□□□□ 0.5
SDCCAG3-201ENST00000298537 APOC4P55056 127 aa18.15■□□□□ 0.5
SDCCAG3-201ENST00000298537 NTM-AS1Q6ZSK4 140 aa18.14■□□□□ 0.49
SDCCAG3-201ENST00000298537 RPL36AP83881 106 aaKnown RBP18.14■□□□□ 0.49
SDCCAG3-201ENST00000298537 MPV17L2Q567V2 206 aa18.14■□□□□ 0.49
SDCCAG3-201ENST00000298537 RPL36ALQ969Q0 106 aaKnown RBP18.14■□□□□ 0.49
SDCCAG3-201ENST00000298537 UBE2D3P61077 147 aa18.13■□□□□ 0.49
SDCCAG3-201ENST00000298537 UBE2D2P62837 147 aa18.13■□□□□ 0.49
SDCCAG3-201ENST00000298537 FAM222AQ5U5X8 452 aa18.13■□□□□ 0.49
SDCCAG3-201ENST00000298537 LINC01549A6NIU2 74 aa18.12■□□□□ 0.49
SDCCAG3-201ENST00000298537 MAPKAPK5-AS1Q8N8E1 139 aa18.12■□□□□ 0.49
SDCCAG3-201ENST00000298537 DNAH3Q8TD57 4116 aa18.12■□□□□ 0.49
SDCCAG3-201ENST00000298537 IGHV4-28A0A0C4DH34 117 aa18.12■□□□□ 0.49
SDCCAG3-201ENST00000298537 TRBV10-1A0A0K0K1A3 114 aa18.12■□□□□ 0.49
SDCCAG3-201ENST00000298537 UBE2D4Q9Y2X8 147 aa18.12■□□□□ 0.49
SDCCAG3-201ENST00000298537 LINC00612Q8N6U2 182 aa18.11■□□□□ 0.49
SDCCAG3-201ENST00000298537 TRAV8-6A0A0B4J262 113 aa18.11■□□□□ 0.49
SDCCAG3-201ENST00000298537 LINC00694P0DN24 101 aa18.11■□□□□ 0.49
SDCCAG3-201ENST00000298537 SMIM9A6NGZ8 99 aa18.1■□□□□ 0.49
SDCCAG3-201ENST00000298537 NOTCH1P46531 2555 aa18.09■□□□□ 0.49
SDCCAG3-201ENST00000298537 G3V4G9 280 aa18.09■□□□□ 0.49
SDCCAG3-201ENST00000298537 TRBV6-4A0A1B0GX49 114 aa18.09■□□□□ 0.49
SDCCAG3-201ENST00000298537 CELA1Q9UNI1 258 aa18.08■□□□□ 0.48
SDCCAG3-201ENST00000298537 Q6ZUT4 128 aa18.07■□□□□ 0.48
SDCCAG3-201ENST00000298537 VCX2Q9H322 139 aa18.07■□□□□ 0.48
SDCCAG3-201ENST00000298537 PYGO1Q9Y3Y4 419 aa18.07■□□□□ 0.48
SDCCAG3-201ENST00000298537 A0A0J9YXV3 536 aa18.07■□□□□ 0.48
SDCCAG3-201ENST00000298537 Q8NAQ8 132 aa18.07■□□□□ 0.48
SDCCAG3-201ENST00000298537 EGFEM1PQ0D2K5 195 aa18.05■□□□□ 0.48
SDCCAG3-201ENST00000298537 TMEM170BQ5T4T1 132 aa18.05■□□□□ 0.48
SDCCAG3-201ENST00000298537 DAZ4Q86SG3 579 aaKnown RBP18.05■□□□□ 0.48
SDCCAG3-201ENST00000298537 AMELXQ99217 191 aa18.05■□□□□ 0.48
SDCCAG3-201ENST00000298537 RETNQ9HD89 108 aa18.05■□□□□ 0.48
SDCCAG3-201ENST00000298537 DAZ3Q9NR90 486 aaKnown RBP18.05■□□□□ 0.48
SDCCAG3-201ENST00000298537 RNF183Q96D59 192 aa18.04■□□□□ 0.48
SDCCAG3-201ENST00000298537 CHAC1Q9BUX1 264 aa18.04■□□□□ 0.48
SDCCAG3-201ENST00000298537 Q6ZVH6 145 aa18.04■□□□□ 0.48
SDCCAG3-201ENST00000298537 PRADC1Q9BSG0 188 aa18.04■□□□□ 0.48
SDCCAG3-201ENST00000298537 BVES-AS1Q5T3Y7 98 aa18.03■□□□□ 0.48
SDCCAG3-201ENST00000298537 RBX1P62877 108 aa18.03■□□□□ 0.48
SDCCAG3-201ENST00000298537 SPANXA1Q9NS26 97 aa18.01■□□□□ 0.47
SDCCAG3-201ENST00000298537 TRBV25-1A0A075B6N4 114 aa18■□□□□ 0.47
SDCCAG3-201ENST00000298537 E9PLD3 99 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms