RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CBLN2Q8IUK8 224 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 NRACQ8N912 160 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 ZNRF2Q8NHG8 242 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 KRTAP1-5Q9BYS1 174 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 URGCP-MRPS24S4R325 110 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 TRBV7-3A0A075B6L6 115 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 TRAV9-1A0A075B6T8 112 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 TGIF2-C20orf24A0A0A6YYL0 155 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 IGHV3-38A0A0C4DH36 116 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 A0A1B0GW15 77 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 SMIM17P0DL12 118 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 SRIP30626 198 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 ELOBQ15370 118 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 RASL11AQ6T310 242 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 NTM-AS1Q6ZSK4 140 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 NEGR1Q7Z3B1 354 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 BORCS7Q96B45 105 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 BTF3L4Q96K17 158 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 PRADC1Q9BSG0 188 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
SSX3-201ENST00000298396 DNAH5Q8TE73 4624 aa4.02□□□□□ -1.77
SSX3-201ENST00000298396 PKHD1P08F94 4074 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 SCO1O75880 301 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 LY6G6CO95867 125 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 WFDC10BQ8IUB3 73 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 ATP6V0E2Q8NHE4 81 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 MRAP2Q96G30 205 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 UPK3BQ9BT76 320 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 GTSF1LQ9H1H1 148 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 NIT2Q9NQR4 276 aa4.01□□□□□ -1.77
SSX3-201ENST00000298396 TRBV24-1A0A075B6N3 115 aa4□□□□□ -1.77
SSX3-201ENST00000298396 D6R8Y8 96 aa4□□□□□ -1.77
SSX3-201ENST00000298396 ATP6V1G1O75348 118 aa4□□□□□ -1.77
SSX3-201ENST00000298396 NPYP01303 97 aa4□□□□□ -1.77
SSX3-201ENST00000298396 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
SSX3-201ENST00000298396 RPL36AP83881 106 aaKnown RBP4□□□□□ -1.77
SSX3-201ENST00000298396 OR10J3Q5JRS4 329 aa4□□□□□ -1.77
SSX3-201ENST00000298396 LELP1Q5T871 98 aa4□□□□□ -1.77
SSX3-201ENST00000298396 KCNIP4Q6PIL6 250 aa4□□□□□ -1.77
SSX3-201ENST00000298396 Q6ZR54 194 aa4□□□□□ -1.77
SSX3-201ENST00000298396 SMIM15Q7Z3B0 74 aa4□□□□□ -1.77
SSX3-201ENST00000298396 RPL36ALQ969Q0 106 aaKnown RBP4□□□□□ -1.77
SSX3-201ENST00000298396 DNAJC30Q96LL9 226 aa4□□□□□ -1.77
SSX3-201ENST00000298396 IGLV2-18A0A075B6J9 118 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 SDHAF1A6NFY7 115 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 H7C1H1 209 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 TSHBP01222 138 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 S100A8P05109 93 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 CCL18P55774 89 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 KIAA1644Q3SXP7 199 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 SH2D6Q7Z4S9 175 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 UBE2DNLQ8IWF7 75 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 FRZBQ92765 325 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 TMEM70Q9BUB7 260 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 GNB1LQ9BYB4 327 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 TNFRSF18Q9Y5U5 241 aa3.99□□□□□ -1.77
SSX3-201ENST00000298396 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
SSX3-201ENST00000298396 TRBV6-8A0A0A6YYG3 113 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 TRBV27A0A0K0K1C4 114 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 COLCA2A8K830 154 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 PHOX2AO14813 284 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 SIVA1O15304 175 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 S100PP25815 95 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 CKS2P33552 79 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 SUMO2P61956 95 aaKnown RBP3.98□□□□□ -1.77
SSX3-201ENST00000298396 RPL32P62910 135 aaKnown RBP3.98□□□□□ -1.77
SSX3-201ENST00000298396 DAZ4Q86SG3 579 aaKnown RBP3.98□□□□□ -1.77
SSX3-201ENST00000298396 PRELID3AQ96N28 172 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 CHCHD7Q9BUK0 85 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 Q9H8V8 135 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 ST20Q9HBF5 79 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 DAZ3Q9NR90 486 aaKnown RBP3.98□□□□□ -1.77
SSX3-201ENST00000298396 SMCO4Q9NRQ5 59 aa3.98□□□□□ -1.77
SSX3-201ENST00000298396 DNAH8Q96JB1 4490 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 NBDYA0A0U1RRE5 68 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 PRSS47A8MTI9 375 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 M0R2N4 97 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 HLA-DQA1P01909 254 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 APCSP02743 223 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 NPSP0C0P6 89 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 ESDP10768 282 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 IQCJQ1A5X6 159 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 MPV17L2Q567V2 206 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 LINC01556Q5JQF7 62 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 NIT1Q86X76 327 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 ORMDL3Q8N138 153 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 C20orf78Q9BR46 151 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 ALKBH7Q9BT30 221 aaPredicted RBP3.97□□□□□ -1.77
SSX3-201ENST00000298396 SMIM2Q9BVW6 85 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
SSX3-201ENST00000298396 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
SSX3-201ENST00000298396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
SSX3-201ENST00000298396 IGHV1-24A0A0C4DH33 117 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
SSX3-201ENST00000298396 I3L3M4 83 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 RTL8CO15255 209 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms