RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 C3orf56Q8N813 242 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 ATP6V0E2Q8NHE4 81 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 CLEC2BQ92478 149 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 RHODO00212 210 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 TSHBP01222 138 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 PEMTQ9UBM1 199 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 U3KQE9 123 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 TRGV11A0A075B6L2 103 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 TRAV13-1A0A0B4J241 112 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 PROK1P58294 105 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 SVEP1Q4LDE5 3571 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 IGIPA6NJ69 53 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 CARD19Q96LW7 228 aa10□□□□□ -0.81
SCAF4-201ENST00000286835 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
SCAF4-201ENST00000286835 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
SCAF4-201ENST00000286835 J3QLI3 93 aa9.99□□□□□ -0.81
SCAF4-201ENST00000286835 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
SCAF4-201ENST00000286835 HELZ2Q9BYK8 2649 aaKnown RBP9.99□□□□□ -0.81
SCAF4-201ENST00000286835 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
SCAF4-201ENST00000286835 WFDC11Q8NEX6 87 aa9.99□□□□□ -0.81
SCAF4-201ENST00000286835 PRSS47A8MTI9 375 aa9.98□□□□□ -0.81
SCAF4-201ENST00000286835 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
SCAF4-201ENST00000286835 C20orf203Q8NBC4 194 aa9.98□□□□□ -0.81
SCAF4-201ENST00000286835 MUC4Q99102 2169 aa9.98□□□□□ -0.81
SCAF4-201ENST00000286835 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
SCAF4-201ENST00000286835 Q6ZSV7 163 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 UBE2E2Q96LR5 201 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 VPREB3Q9UKI3 123 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 COL12A1Q99715 3063 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 MED14OSP0DP75 135 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 UBE2D3P61077 147 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 UBE2D2P62837 147 aa9.97□□□□□ -0.81
SCAF4-201ENST00000286835 A0A0J9YXY3 114 aa9.96□□□□□ -0.81
SCAF4-201ENST00000286835 RHOHQ15669 191 aa9.96□□□□□ -0.81
SCAF4-201ENST00000286835 IFITM1P13164 125 aa9.96□□□□□ -0.81
SCAF4-201ENST00000286835 KRTAP10-9P60411 292 aa9.96□□□□□ -0.81
SCAF4-201ENST00000286835 GAGE5Q13069 117 aa9.96□□□□□ -0.81
SCAF4-201ENST00000286835 GAGE6Q13070 117 aa9.96□□□□□ -0.81
SCAF4-201ENST00000286835 M0QY20 66 aa9.96□□□□□ -0.82
SCAF4-201ENST00000286835 IGHG2P01859 326 aa9.96□□□□□ -0.82
SCAF4-201ENST00000286835 LINC01619G3V211 115 aa9.96□□□□□ -0.82
SCAF4-201ENST00000286835 HIST2H2BDQ6DRA6 164 aa9.96□□□□□ -0.82
SCAF4-201ENST00000286835 TRAV4A0A0B4J268 109 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 TRIAP1O43715 76 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 ICOSQ9Y6W8 199 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 IGLV4-3A0A075B6K6 122 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 USP24Q9UPU5 2620 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 DCHS2Q6V1P9 2916 aa9.95□□□□□ -0.82
SCAF4-201ENST00000286835 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 C19orf54Q5BKX5 351 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 XCL2Q9UBD3 114 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 IGHV4OR15-8A0A075B7B6 117 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 A0A087WW49 117 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 STHQ8IWL8 128 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 A0A0J9YX75 114 aa9.94□□□□□ -0.82
SCAF4-201ENST00000286835 FHL3Q13643 280 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 F8P00451 2351 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 GAGE7O76087 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 GAGE4Q13068 117 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 KLLNB2CW77 178 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 UBE2L6O14933 153 aa9.93□□□□□ -0.82
SCAF4-201ENST00000286835 SOCS3O14543 225 aa9.92□□□□□ -0.82
SCAF4-201ENST00000286835 APRG1Q8IVJ8 170 aa9.92□□□□□ -0.82
SCAF4-201ENST00000286835 LGALS9O00182 355 aa9.92□□□□□ -0.82
SCAF4-201ENST00000286835 RS1O15537 224 aa9.92□□□□□ -0.82
SCAF4-201ENST00000286835 HOXD3P31249 432 aaPredicted RBP9.92□□□□□ -0.82
SCAF4-201ENST00000286835 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 Q9H8V8 135 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 ELANEP08246 267 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 LINC00315P59091 139 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 TMEM263Q8WUH6 116 aaKnown RBP9.91□□□□□ -0.82
SCAF4-201ENST00000286835 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
SCAF4-201ENST00000286835 SLURP1P55000 103 aa9.9□□□□□ -0.82
SCAF4-201ENST00000286835 SMIM20Q8N5G0 67 aa9.9□□□□□ -0.82
SCAF4-201ENST00000286835 DCANP1Q8TF63 244 aa9.9□□□□□ -0.82
SCAF4-201ENST00000286835 H3BUA1 57 aa9.9□□□□□ -0.82
SCAF4-201ENST00000286835 CRLF1O75462 422 aa9.9□□□□□ -0.82
SCAF4-201ENST00000286835 DNAL4O96015 105 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
SCAF4-201ENST00000286835 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
SCAF4-201ENST00000286835 CFHR3Q02985 330 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 C11orf68Q9H3H3 251 aaKnown RBP9.89□□□□□ -0.83
SCAF4-201ENST00000286835 A0A0B4J2C4 111 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 A6NDX4 124 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 RNASE1P07998 156 aaKnown RBP9.89□□□□□ -0.83
SCAF4-201ENST00000286835 FLNCQ14315 2725 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 IGHV1-58A0A0C4DH39 117 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
SCAF4-201ENST00000286835 IGSF10Q6WRI0 2623 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms