RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 MLST8Q9BVC4 326 aa8.54□□□□□ -1.04
USP6NL-201ENST00000277575 KIR2DL5BA0A0G2JN68 375 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 KIR2DL5BA0A0G2JPC4 375 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 H3BMG7 143 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 CFC1BP0CG36 223 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 CFC1P0CG37 223 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 TDRG1Q3Y452 100 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 C10orf99Q6UWK7 81 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 KIR2DL5AQ8N109 375 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 LRP4O75096 1905 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 PRO0255Q9UI72 69 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 ZFAND3Q9H8U3 227 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 K7EP34 96 aa8.53□□□□□ -1.04
USP6NL-201ENST00000277575 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.04
USP6NL-201ENST00000277575 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 F8W1H4 67 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 UBE2BP63146 152 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 ACANP16112 2415 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 K7EP13 123 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 IFITM1P13164 125 aa8.52□□□□□ -1.05
USP6NL-201ENST00000277575 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
USP6NL-201ENST00000277575 A0A1B0GXF2 115 aa8.51□□□□□ -1.05
USP6NL-201ENST00000277575 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
USP6NL-201ENST00000277575 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
USP6NL-201ENST00000277575 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
USP6NL-201ENST00000277575 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
USP6NL-201ENST00000277575 NPSP0C0P6 89 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 Q6ZTI0 123 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 Q8N6K4 173 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 KLK12Q9UKR0 248 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 PRRC2CQ9Y520 2896 aaKnown RBP8.5□□□□□ -1.05
USP6NL-201ENST00000277575 BSNQ9UPA5 3926 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 SND1-IT1Q9HBX3 110 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 FLNBO75369 2602 aaKnown RBP8.5□□□□□ -1.05
USP6NL-201ENST00000277575 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 IGLC6P0CF74 106 aa8.5□□□□□ -1.05
USP6NL-201ENST00000277575 UBL5Q9BZL1 73 aa8.49□□□□□ -1.05
USP6NL-201ENST00000277575 A4D1N5 150 aa8.49□□□□□ -1.05
USP6NL-201ENST00000277575 HAMPP81172 84 aa8.49□□□□□ -1.05
USP6NL-201ENST00000277575 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
USP6NL-201ENST00000277575 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
USP6NL-201ENST00000277575 ODF1Q14990 250 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 Q6ZVH6 145 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 PSMB8P28062 276 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 ATMQ13315 3056 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 MBD6Q96DN6 1003 aa8.48□□□□□ -1.05
USP6NL-201ENST00000277575 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
USP6NL-201ENST00000277575 E9PLD3 99 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 CCL25O15444 150 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
USP6NL-201ENST00000277575 DSCR8Q96T75 97 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 P0DMU3 169 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 FAM231AP0DMU4 169 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 FAM231CP0DMU5 169 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 ZFAND2AQ8N6M9 145 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 NTN5Q8WTR8 489 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-201ENST00000277575 LY6G6DO95868 133 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
USP6NL-201ENST00000277575 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 LINC01006Q8NI28 216 aa8.47□□□□□ -1.05
USP6NL-201ENST00000277575 GDF5OSQ5U4N7 250 aa8.46□□□□□ -1.05
USP6NL-201ENST00000277575 CEMP1Q6PRD7 247 aaPredicted RBP8.46□□□□□ -1.05
USP6NL-201ENST00000277575 DAND5Q8N907 189 aa8.46□□□□□ -1.05
USP6NL-201ENST00000277575 ZNF702PQ9H963 129 aa8.46□□□□□ -1.05
USP6NL-201ENST00000277575 TINCRA0A1B0GVN0 87 aa8.46□□□□□ -1.05
USP6NL-201ENST00000277575 Q6ZS46 218 aa8.46□□□□□ -1.05
USP6NL-201ENST00000277575 NDUFA1O15239 70 aa8.46□□□□□ -1.06
USP6NL-201ENST00000277575 SPAG11BQ08648 103 aa8.46□□□□□ -1.06
USP6NL-201ENST00000277575 AVPP01185 164 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 ETDCA0A1B0GVM5 59 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 IGLL5B9A064 214 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 CRIP1P50238 77 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 HIST2H2BDQ6DRA6 164 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 FXYD2P54710 66 aa8.45□□□□□ -1.06
USP6NL-201ENST00000277575 SMIM9A6NGZ8 99 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 BAALC-AS2P0C853 105 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 Q6ZUT4 128 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 C11orf45Q8TAV5 145 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 RELNP78509 3460 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 HIGD1BQ9P298 99 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 A0A1W2PPR1 153 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 TM2D2Q9BX73 214 aa8.44□□□□□ -1.06
USP6NL-201ENST00000277575 KRTAP10-9P60411 292 aa8.43□□□□□ -1.06
USP6NL-201ENST00000277575 LINC00482Q8N8I6 264 aa8.43□□□□□ -1.06
USP6NL-201ENST00000277575 IGHV1-58A0A0C4DH39 117 aa8.43□□□□□ -1.06
USP6NL-201ENST00000277575 H0YGX0 51 aa8.43□□□□□ -1.06
USP6NL-201ENST00000277575 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
USP6NL-201ENST00000277575 DEFB105AQ8NG35 78 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms