RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 UBE2D3P61077 147 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 UBE2D2P62837 147 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 AGRNO00468 2067 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 TRAV2A0A0B4J234 112 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 A8MTW9 85 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 LEPROTO15243 131 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 NDUFA11Q86Y39 141 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
C9orf3-201ENST00000277198 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 P0DMU3 169 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 LGALS3P17931 250 aaKnown RBP9.48□□□□□ -0.89
C9orf3-201ENST00000277198 HOXD3P31249 432 aaPredicted RBP9.48□□□□□ -0.89
C9orf3-201ENST00000277198 ETDBQ3ZM63 59 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 PTH2Q96A98 100 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 AMELXQ99217 191 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 VWFP04275 2813 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 TSPAN13O95857 204 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 HIST2H2BDQ6DRA6 164 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 C10orf99Q6UWK7 81 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 TMEM86BQ8N661 226 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 SPATA25Q9BR10 227 aa9.48□□□□□ -0.89
C9orf3-201ENST00000277198 IGKV3-20P01619 116 aa9.47□□□□□ -0.89
C9orf3-201ENST00000277198 EMP1P54849 157 aa9.47□□□□□ -0.89
C9orf3-201ENST00000277198 KRTAP10-3P60369 221 aa9.47□□□□□ -0.89
C9orf3-201ENST00000277198 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
C9orf3-201ENST00000277198 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.89
C9orf3-201ENST00000277198 C10orf126Q8N4M7 172 aa9.46□□□□□ -0.89
C9orf3-201ENST00000277198 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.89
C9orf3-201ENST00000277198 VCX2Q9H322 139 aa9.46□□□□□ -0.89
C9orf3-201ENST00000277198 ZNF702PQ9H963 129 aa9.46□□□□□ -0.89
C9orf3-201ENST00000277198 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.9
C9orf3-201ENST00000277198 TMEM238C9JI98 176 aa9.46□□□□□ -0.9
C9orf3-201ENST00000277198 Q6ZSV7 163 aa9.46□□□□□ -0.9
C9orf3-201ENST00000277198 SH2D6Q7Z4S9 175 aa9.46□□□□□ -0.9
C9orf3-201ENST00000277198 A8MWV9 139 aa9.45□□□□□ -0.9
C9orf3-201ENST00000277198 RHODO00212 210 aa9.45□□□□□ -0.9
C9orf3-201ENST00000277198 CFC1BP0CG36 223 aa9.45□□□□□ -0.9
C9orf3-201ENST00000277198 CFC1P0CG37 223 aa9.45□□□□□ -0.9
C9orf3-201ENST00000277198 TCTEX1D4Q5JR98 221 aa9.45□□□□□ -0.9
C9orf3-201ENST00000277198 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 APOMO95445 188 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
C9orf3-201ENST00000277198 LINC01006Q8NI28 216 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 C1QTNF4Q9BXJ3 329 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 LOC107984156A0A0G2JMH3 177 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 NDUFA7O95182 113 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 ARL17AQ8IVW1 177 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 LINC00467Q9BRT7 94 aa9.44□□□□□ -0.9
C9orf3-201ENST00000277198 TSSC4Q9Y5U2 329 aaPredicted RBP9.44□□□□□ -0.9
C9orf3-201ENST00000277198 CMYA5Q8N3K9 4069 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 Q8N2B8 174 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 PEMTQ9UBM1 199 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 WNK1Q9H4A3 2382 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 A0A0B4J2C4 111 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 H3BMM0 161 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 M0R2P5 195 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
C9orf3-201ENST00000277198 FOXI1Q12951 378 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 SBSPONQ8IVN8 264 aa9.43□□□□□ -0.9
C9orf3-201ENST00000277198 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-201ENST00000277198 PSMB2P49721 201 aa9.42□□□□□ -0.9
C9orf3-201ENST00000277198 DEFB104AQ8WTQ1 72 aa9.42□□□□□ -0.9
C9orf3-201ENST00000277198 M0QXV9 152 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
C9orf3-201ENST00000277198 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 AZU1P20160 251 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 PROK1P58294 105 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
C9orf3-201ENST00000277198 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 DNAJC30Q96LL9 226 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
C9orf3-201ENST00000277198 SPANXA1Q9NS26 97 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
C9orf3-201ENST00000277198 DEFB131AP59861 70 aa9.41□□□□□ -0.9
C9orf3-201ENST00000277198 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
C9orf3-201ENST00000277198 A4D1N5 150 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 KNCNA6PVL3 124 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 CD28P10747 220 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 CLUHP3Q96NS8 147 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 SPXQ9BT56 116 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 C16orf95Q9H693 158 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 TCL1BO95988 128 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 MTURNQ8N3F0 131 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 C4orf3Q8WVX3 66 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms