RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
PDGFC-201ENST00000274071 NDPQ00604 133 aa6.8□□□□□ -1.32
PDGFC-201ENST00000274071 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
PDGFC-201ENST00000274071 C9orf47Q6ZRZ4 202 aa6.8□□□□□ -1.32
PDGFC-201ENST00000274071 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
PDGFC-201ENST00000274071 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
PDGFC-201ENST00000274071 VCYO14598 125 aa6.8□□□□□ -1.32
PDGFC-201ENST00000274071 IGHV3OR16-8A0A075B7F1 116 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 CCL21O00585 134 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 PHLDA3Q9Y5J5 127 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 IGHV4OR15-8A0A075B7B6 117 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 A0A087WW49 117 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 IGHV1-18A0A0C4DH31 117 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 IGLV1-44P01699 117 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 Q9HAA7 133 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 C14orf132Q9NPU4 83 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 FAM215AQ9Y5M1 114 aa6.79□□□□□ -1.32
PDGFC-201ENST00000274071 A8MZ25 164 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 F8W735 103 aaPredicted RBP6.78□□□□□ -1.32
PDGFC-201ENST00000274071 IGHV1-69P01742 117 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 PRR9Q5T870 116 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 TRBV12-3P01733 135 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 S100A4P26447 101 aaKnown RBP6.78□□□□□ -1.32
PDGFC-201ENST00000274071 MRPS36P82909 103 aaKnown RBP6.78□□□□□ -1.32
PDGFC-201ENST00000274071 CCKP06307 115 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 LINC00315P59091 139 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
PDGFC-201ENST00000274071 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 ADGRG4Q8IZF6 3080 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 ZFHX3Q15911 3703 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV1-58A0A0C4DH39 117 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 IGF1P05019 195 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 IGF2RP11717 2491 aa6.77□□□□□ -1.33
PDGFC-201ENST00000274071 TRBV7-6A0A0J9YX20 115 aa6.76□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV3-23P01764 117 aa6.76□□□□□ -1.33
PDGFC-201ENST00000274071 RETNQ9HD89 108 aa6.76□□□□□ -1.33
PDGFC-201ENST00000274071 M0R1B8 84 aa6.76□□□□□ -1.33
PDGFC-201ENST00000274071 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
PDGFC-201ENST00000274071 CHD8Q9HCK8 2581 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV3-35A0A0C4DH35 117 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 CLPSL1A2RUU4 121 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 TIMM17BO60830 172 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 PCNX1Q96RV3 2341 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 VMO1Q7Z5L0 202 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 TACC2O95359 2948 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 NCOR2Q9Y618 2525 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 HOXD3P31249 432 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-201ENST00000274071 VSIG2Q96IQ7 327 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 BPESC1Q9GZL8 116 aa6.75□□□□□ -1.33
PDGFC-201ENST00000274071 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
PDGFC-201ENST00000274071 RBM3P98179 157 aaKnown RBP6.74□□□□□ -1.33
PDGFC-201ENST00000274071 WNK2Q9Y3S1 2297 aa6.74□□□□□ -1.33
PDGFC-201ENST00000274071 GNRH2O43555 120 aa6.74□□□□□ -1.33
PDGFC-201ENST00000274071 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV3-66A0A0C4DH42 116 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 CTSGP08311 255 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 PRB3Q04118 309 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-201ENST00000274071 C22orf34Q6ZV56 151 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 LINC00308Q8TCZ7 52 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 Q96MF0 132 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 OBSCN-AS1Q96MR7 158 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 RNASE3P12724 160 aaKnown RBP6.73□□□□□ -1.33
PDGFC-201ENST00000274071 Q8NA96 180 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 TLN1Q9Y490 2541 aaKnown RBP6.73□□□□□ -1.33
PDGFC-201ENST00000274071 MUC4Q99102 2169 aa6.73□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV1-3A0A0C4DH29 117 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 F5H697 171 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 RPL11P62913 178 aaKnown RBP6.72□□□□□ -1.33
PDGFC-201ENST00000274071 PTPRQQ9UMZ3 2332 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 IGLV11-55A0A075B6I3 123 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 A0A087WWL8 130 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 F8WEM9 126 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 COPS9Q8WXC6 57 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 RMI2Q96E14 147 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 PIEZO1Q92508 2521 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 RELNP78509 3460 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV3OR16-13A0A075B7E8 117 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 IGHV3-74A0A0B4J1X5 117 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 ENHOQ6UWT2 76 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 APRG1Q8IVJ8 170 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 POLEQ07864 2286 aa6.72□□□□□ -1.33
PDGFC-201ENST00000274071 SPTA1P02549 2419 aa6.71□□□□□ -1.33
PDGFC-201ENST00000274071 ROS1P08922 2347 aa6.71□□□□□ -1.33
PDGFC-201ENST00000274071 FAM104AQ969W3 186 aa6.71□□□□□ -1.34
PDGFC-201ENST00000274071 TPRP12270 2363 aaKnown RBP6.71□□□□□ -1.34
PDGFC-201ENST00000274071 IGHV1-46P01743 117 aa6.71□□□□□ -1.34
PDGFC-201ENST00000274071 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
PDGFC-201ENST00000274071 TRAV21A0A0B4J279 112 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 IGHV1-8P0DP01 117 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 ZFAND2AQ8N6M9 145 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms