RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 Q6ZSN1 163 aa12.39□□□□□ -0.43
RTN1-201ENST00000267484 C18orf65Q6ZTR6 163 aa12.39□□□□□ -0.43
RTN1-201ENST00000267484 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
RTN1-201ENST00000267484 ADAMTSL4-AS1Q5T5F5 129 aa12.38□□□□□ -0.43
RTN1-201ENST00000267484 ANKRD17O75179 2603 aaKnown RBP12.38□□□□□ -0.43
RTN1-201ENST00000267484 TLN2Q9Y4G6 2542 aa12.38□□□□□ -0.43
RTN1-201ENST00000267484 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
RTN1-201ENST00000267484 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
RTN1-201ENST00000267484 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
RTN1-201ENST00000267484 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
RTN1-201ENST00000267484 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
RTN1-201ENST00000267484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.37□□□□□ -0.43
RTN1-201ENST00000267484 IGKV2-29A2NJV5 120 aaPredicted RBP12.37□□□□□ -0.43
RTN1-201ENST00000267484 M0R2P5 195 aa12.37□□□□□ -0.43
RTN1-201ENST00000267484 DUX3Q96PT4 197 aa12.37□□□□□ -0.43
RTN1-201ENST00000267484 ODF3Q96PU9 254 aa12.37□□□□□ -0.43
RTN1-201ENST00000267484 DEFB131AP59861 70 aa12.36□□□□□ -0.43
RTN1-201ENST00000267484 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
RTN1-201ENST00000267484 B4DSR2 109 aa12.36□□□□□ -0.43
RTN1-201ENST00000267484 WNK1Q9H4A3 2382 aa12.35□□□□□ -0.43
RTN1-201ENST00000267484 DAND5Q8N907 189 aa12.35□□□□□ -0.43
RTN1-201ENST00000267484 TRIAP1O43715 76 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 SLURP1P55000 103 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 LITAFQ99732 161 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 A0A0B4J2C4 111 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 TRGV11A0A075B6L2 103 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 FBN2P35556 2912 aa12.34□□□□□ -0.43
RTN1-201ENST00000267484 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
RTN1-201ENST00000267484 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
RTN1-201ENST00000267484 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
RTN1-201ENST00000267484 TEX49A0A1B0GTD5 131 aa12.33□□□□□ -0.44
RTN1-201ENST00000267484 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
RTN1-201ENST00000267484 ZFYVE26Q68DK2 2539 aa12.33□□□□□ -0.44
RTN1-201ENST00000267484 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
RTN1-201ENST00000267484 ABCA12Q86UK0 2595 aa12.33□□□□□ -0.44
RTN1-201ENST00000267484 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
RTN1-201ENST00000267484 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
RTN1-201ENST00000267484 GATA3P23771 443 aa12.32□□□□□ -0.44
RTN1-201ENST00000267484 TEX15Q9BXT5 2789 aa12.31□□□□□ -0.44
RTN1-201ENST00000267484 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
RTN1-201ENST00000267484 MRPS36P82909 103 aaKnown RBP12.31□□□□□ -0.44
RTN1-201ENST00000267484 RNF183Q96D59 192 aa12.31□□□□□ -0.44
RTN1-201ENST00000267484 PRORYQ9H606 182 aa12.31□□□□□ -0.44
RTN1-201ENST00000267484 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
RTN1-201ENST00000267484 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
RTN1-201ENST00000267484 CHD6Q8TD26 2715 aa12.3□□□□□ -0.44
RTN1-201ENST00000267484 LRRK2Q5S007 2527 aa12.3□□□□□ -0.44
RTN1-201ENST00000267484 ATXN8Q156A1 80 aa12.3□□□□□ -0.44
RTN1-201ENST00000267484 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
RTN1-201ENST00000267484 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
RTN1-201ENST00000267484 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
RTN1-201ENST00000267484 EPG5Q9HCE0 2579 aa12.29□□□□□ -0.44
RTN1-201ENST00000267484 IGHV1-58A0A0C4DH39 117 aa12.29□□□□□ -0.44
RTN1-201ENST00000267484 A0A0U1RRA0 63 aa12.29□□□□□ -0.44
RTN1-201ENST00000267484 CRLF1O75462 422 aa12.29□□□□□ -0.44
RTN1-201ENST00000267484 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
RTN1-201ENST00000267484 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
RTN1-201ENST00000267484 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
RTN1-201ENST00000267484 H3BMM0 161 aa12.27□□□□□ -0.44
RTN1-201ENST00000267484 ZNF625Q96I27 306 aaPredicted RBP12.27□□□□□ -0.44
RTN1-201ENST00000267484 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
RTN1-201ENST00000267484 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.45
RTN1-201ENST00000267484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.27□□□□□ -0.45
RTN1-201ENST00000267484 CDKN2A-AS1Q9UH64 79 aa12.27□□□□□ -0.45
RTN1-201ENST00000267484 TRAV4A0A0B4J268 109 aa12.26□□□□□ -0.45
RTN1-201ENST00000267484 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
RTN1-201ENST00000267484 ZNF702PQ9H963 129 aa12.26□□□□□ -0.45
RTN1-201ENST00000267484 JMJD1CQ15652 2540 aa12.26□□□□□ -0.45
RTN1-201ENST00000267484 LINC01587Q99440 93 aa12.26□□□□□ -0.45
RTN1-201ENST00000267484 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.45
RTN1-201ENST00000267484 NF1P21359 2839 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 NDUFA7O95182 113 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 ZFAND6Q6FIF0 208 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 ANAPC13Q9BS18 74 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 AKAP9Q99996 3911 aa12.25□□□□□ -0.45
RTN1-201ENST00000267484 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 TEX29Q8N6K0 151 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 NAV2Q8IVL1 2488 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 MIAQ16674 131 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 C2orf82Q6UX34 121 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 LINC01356Q8N9X3 169 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 VPREB3Q9UKI3 123 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 COX6A2Q02221 97 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 UBE2E2Q96LR5 201 aa12.24□□□□□ -0.45
RTN1-201ENST00000267484 TRBV10-2A0A0K0K1G8 114 aa12.23□□□□□ -0.45
RTN1-201ENST00000267484 TINCRA0A1B0GVN0 87 aa12.23□□□□□ -0.45
RTN1-201ENST00000267484 H7C423 109 aa12.23□□□□□ -0.45
RTN1-201ENST00000267484 CITED1Q99966 193 aa12.23□□□□□ -0.45
RTN1-201ENST00000267484 RPL13AP40429 203 aaKnown RBP12.22□□□□□ -0.45
RTN1-201ENST00000267484 TMEM89A2RUT3 159 aa12.22□□□□□ -0.45
RTN1-201ENST00000267484 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
RTN1-201ENST00000267484 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
RTN1-201ENST00000267484 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
RTN1-201ENST00000267484 XCL2Q9UBD3 114 aa12.21□□□□□ -0.45
RTN1-201ENST00000267484 UBE2WQ96B02 151 aa12.21□□□□□ -0.45
RTN1-201ENST00000267484 SNCGO76070 127 aa12.21□□□□□ -0.46
RTN1-201ENST00000267484 TRAV8-4A0A0B4J246 113 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms