RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 HOXD3P31249 432 aaPredicted RBP12.24□□□□□ -0.45
VSX2-201ENST00000261980 PROK1P58294 105 aa12.24□□□□□ -0.45
VSX2-201ENST00000261980 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
VSX2-201ENST00000261980 NRGNQ92686 78 aa12.24□□□□□ -0.45
VSX2-201ENST00000261980 LITAFQ99732 161 aa12.24□□□□□ -0.45
VSX2-201ENST00000261980 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
VSX2-201ENST00000261980 M0R1W7 72 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 POM121L12Q8N7R1 296 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 CELSR2Q9HCU4 2923 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 TENM4Q6N022 2769 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 LST1O00453 97 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 C3orf22Q8N5N4 141 aa12.23□□□□□ -0.45
VSX2-201ENST00000261980 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
VSX2-201ENST00000261980 PPP1R17O96001 155 aa12.22□□□□□ -0.45
VSX2-201ENST00000261980 EBI3Q14213 229 aa12.22□□□□□ -0.45
VSX2-201ENST00000261980 GAGE2AQ6NT46 116 aa12.22□□□□□ -0.45
VSX2-201ENST00000261980 C9orf139Q6ZV77 190 aa12.22□□□□□ -0.45
VSX2-201ENST00000261980 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
VSX2-201ENST00000261980 FAM110DQ8TAY7 271 aaPredicted RBP12.22□□□□□ -0.45
VSX2-201ENST00000261980 ITLN2Q8WWU7 325 aaPredicted RBP12.22□□□□□ -0.45
VSX2-201ENST00000261980 H3BT86 120 aa12.21□□□□□ -0.45
VSX2-201ENST00000261980 ZFP36P26651 326 aaKnown RBP12.21□□□□□ -0.45
VSX2-201ENST00000261980 UCNP55089 124 aa12.21□□□□□ -0.45
VSX2-201ENST00000261980 Q9HAA7 133 aa12.21□□□□□ -0.45
VSX2-201ENST00000261980 NOTCH2Q04721 2471 aa12.21□□□□□ -0.46
VSX2-201ENST00000261980 FLNBO75369 2602 aaKnown RBP12.21□□□□□ -0.46
VSX2-201ENST00000261980 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.46
VSX2-201ENST00000261980 B9A039 149 aa12.21□□□□□ -0.46
VSX2-201ENST00000261980 KMT2BQ9UMN6 2715 aaPredicted RBP12.2□□□□□ -0.46
VSX2-201ENST00000261980 TRBV7-7A0A0K0K1E9 115 aa12.2□□□□□ -0.46
VSX2-201ENST00000261980 DAZ2Q13117 558 aaKnown RBP12.2□□□□□ -0.46
VSX2-201ENST00000261980 SDIM1Q6ZPB5 146 aa12.2□□□□□ -0.46
VSX2-201ENST00000261980 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
VSX2-201ENST00000261980 Q8N2B8 174 aa12.2□□□□□ -0.46
VSX2-201ENST00000261980 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
VSX2-201ENST00000261980 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
VSX2-201ENST00000261980 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
VSX2-201ENST00000261980 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 TRBV27A0A0K0K1C4 114 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 SMIM9A6NGZ8 99 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 ODF3BA8MYP8 253 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 POLQO75417 2590 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 A0A087WW49 117 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 TMEM61Q8N0U2 210 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
VSX2-201ENST00000261980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
VSX2-201ENST00000261980 IGKV3D-7A0A0C4DH55 119 aa12.18□□□□□ -0.46
VSX2-201ENST00000261980 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
VSX2-201ENST00000261980 M0QY20 66 aa12.18□□□□□ -0.46
VSX2-201ENST00000261980 Q8N6K4 173 aa12.18□□□□□ -0.46
VSX2-201ENST00000261980 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
VSX2-201ENST00000261980 NBPF19A0A087WUL8 3843 aa12.17□□□□□ -0.46
VSX2-201ENST00000261980 A0A087WVE0 104 aa12.17□□□□□ -0.46
VSX2-201ENST00000261980 DSCR8Q96T75 97 aa12.17□□□□□ -0.46
VSX2-201ENST00000261980 PTPN13Q12923 2485 aa12.16□□□□□ -0.46
VSX2-201ENST00000261980 SAA4P35542 130 aa12.16□□□□□ -0.46
VSX2-201ENST00000261980 MIAQ16674 131 aa12.16□□□□□ -0.46
VSX2-201ENST00000261980 MRPL53Q96EL3 112 aaKnown RBP12.16□□□□□ -0.46
VSX2-201ENST00000261980 OVOL1O14753 267 aa12.16□□□□□ -0.46
VSX2-201ENST00000261980 UQCRQO14949 82 aa12.15□□□□□ -0.46
VSX2-201ENST00000261980 SPINK13Q1W4C9 94 aa12.15□□□□□ -0.46
VSX2-201ENST00000261980 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
VSX2-201ENST00000261980 CCL21O00585 134 aa12.15□□□□□ -0.46
VSX2-201ENST00000261980 LY6EQ16553 131 aa12.15□□□□□ -0.46
VSX2-201ENST00000261980 C5orf47Q569G3 176 aa12.15□□□□□ -0.47
VSX2-201ENST00000261980 CITED2Q99967 270 aaPredicted RBP12.15□□□□□ -0.47
VSX2-201ENST00000261980 ABCA12Q86UK0 2595 aa12.14□□□□□ -0.47
VSX2-201ENST00000261980 SYNJ2BPP57105 145 aa12.14□□□□□ -0.47
VSX2-201ENST00000261980 PRORYQ9H606 182 aa12.14□□□□□ -0.47
VSX2-201ENST00000261980 J3KT08 172 aa12.14□□□□□ -0.47
VSX2-201ENST00000261980 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 BAALC-AS2P0C853 105 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 CDSNQ15517 529 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 U3KQE9 123 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 IGHV1-58A0A0C4DH39 117 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
VSX2-201ENST00000261980 TIRAPP58753 221 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 CDKN2A-AS1Q9UH64 79 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 PF4V1P10720 104 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 FAM218AQ96MZ4 157 aa12.12□□□□□ -0.47
VSX2-201ENST00000261980 SOCS3O14543 225 aa12.11□□□□□ -0.47
VSX2-201ENST00000261980 C4orf26Q17RF5 130 aa12.11□□□□□ -0.47
VSX2-201ENST00000261980 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
VSX2-201ENST00000261980 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
VSX2-201ENST00000261980 LINC00643Q86TS7 51 aa12.1□□□□□ -0.47
VSX2-201ENST00000261980 C9orf129Q5T035 196 aaKnown RBP12.1□□□□□ -0.47
VSX2-201ENST00000261980 Q9H8V8 135 aa12.1□□□□□ -0.47
VSX2-201ENST00000261980 IGHV3-16A0A0C4DH30 117 aa12.09□□□□□ -0.47
VSX2-201ENST00000261980 A0A1B0GX51 115 aa12.09□□□□□ -0.47
VSX2-201ENST00000261980 HRCT1Q6UXD1 115 aa12.09□□□□□ -0.47
VSX2-201ENST00000261980 DCANP1Q8TF63 244 aa12.09□□□□□ -0.47
VSX2-201ENST00000261980 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms