RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 IGHV4-31P0DP07 118 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 IGLC6P0CF74 106 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 MLST8Q9BVC4 326 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 ZNF706Q9Y5V0 76 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-202ENST00000261517 SMKR1H3BMG3 65 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE2AQ6NT46 116 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 FLNCQ14315 2725 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 PCSK5Q92824 1860 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV4OR15-8A0A075B7B6 117 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 A0A087WW49 117 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 SPINK8P0C7L1 97 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 C20orf203Q8NBC4 194 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 VSIG2Q96IQ7 327 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 Q9H8V8 135 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 IGLL1P15814 213 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 TP73-AS1Q9UF72 201 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 LY6HO94772 140 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 MIAQ16674 131 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 A0A1W2PNU3 283 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 NXPH4O95158 308 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 FXYD7P58549 80 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 CITED2Q99967 270 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 TEN1Q86WV5 123 aa3.29□□□□□ -1.88
VPS13C-202ENST00000261517 LINC00482Q8N8I6 264 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 BOD1L1Q8NFC6 3051 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 MAP6D1Q9H9H5 199 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 PSMB8P28062 276 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 MP68P56378 58 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 ZFP36P26651 326 aaKnown RBP3.28□□□□□ -1.88
VPS13C-202ENST00000261517 RNF183Q96D59 192 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 SND1-IT1Q9HBX3 110 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 ATRQ13535 2644 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 TRACP01848 142 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 MAST4O15021 2626 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 DNAH14Q0VDD8 3507 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 DEFB114Q30KQ6 69 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 C16orf95Q9H693 158 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 TET2Q6N021 2002 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-202ENST00000261517 IGKV1D-37A0A075B6S9 117 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 P0DMU3 169 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 FAM231AP0DMU4 169 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 FAM231CP0DMU5 169 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 SLURP1P55000 103 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 TRBV27A0A0K0K1C4 114 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 F6UB75 175 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 LINC00205P59089 165 aa3.28□□□□□ -1.88
VPS13C-202ENST00000261517 PRRC2AP48634 2157 aaKnown RBP3.28□□□□□ -1.88
VPS13C-202ENST00000261517 DMXL2Q8TDJ6 3036 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 ODF1Q14990 250 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 IMUPQ9GZP8 106 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 HIST1H4AP62805 103 aaKnown RBP3.27□□□□□ -1.89
VPS13C-202ENST00000261517 CFHR3Q02985 330 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 REV3LO60673 3130 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 IGHV3-64A0A075B6Q5 118 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 TRAV10A0A0B4J240 114 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 hADV29S1A0JD25 119 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 IGLV1-40P01703 118 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 BAALC-AS2P0C853 105 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 ZFAND3Q9H8U3 227 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 SS18L2Q9UHA2 77 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 TRAV12-2A0A075B6T6 113 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 UBE2BP63146 152 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 NDUFC1O43677 76 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 CELSR3Q9NYQ7 3312 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 KLLNB2CW77 178 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 RS1O15537 224 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 TRBV12-3P01733 135 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 C4orf48Q5BLP8 95 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 GNRH2O43555 120 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 DIAPH2-AS1Q14236 149 aa3.27□□□□□ -1.89
VPS13C-202ENST00000261517 PRB3Q04118 309 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-202ENST00000261517 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 HIST2H2BDQ6DRA6 164 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 GTSF1Q8WW33 167 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
VPS13C-202ENST00000261517 DHRS4-AS1Q9P1J3 65 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 CDPF1Q6NVV7 123 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 B5MCH6 92 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 F8P00451 2351 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 IGKV1OR2-108A0A075B7D4 117 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 FRYQ5TBA9 3013 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 GAGE12HA6NDE8 117 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 IGFL4Q6B9Z1 124 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 PFN2P35080 140 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 XCL1P47992 114 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 RBM3P98179 157 aaKnown RBP3.26□□□□□ -1.89
VPS13C-202ENST00000261517 C9orf153Q5TBE3 101 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 ZNF843Q8N446 348 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 ZFAND2AQ8N6M9 145 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms