RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 APOC4P55056 127 aa15.99■□□□□ 0.15
SIX3-201ENST00000260653 KRTAP10-11P60412 298 aa15.99■□□□□ 0.15
SIX3-201ENST00000260653 TRAV4A0A0B4J268 109 aa15.98■□□□□ 0.15
SIX3-201ENST00000260653 LGALS9CQ6DKI2 356 aa15.98■□□□□ 0.15
SIX3-201ENST00000260653 NEXN-AS1Q8NBZ9 246 aa15.98■□□□□ 0.15
SIX3-201ENST00000260653 TNFRSF18Q9Y5U5 241 aa15.98■□□□□ 0.15
SIX3-201ENST00000260653 COX11Q9Y6N1 276 aa15.98■□□□□ 0.15
SIX3-201ENST00000260653 PRSS1P07477 247 aa15.98■□□□□ 0.15
SIX3-201ENST00000260653 STPG4Q8N801 248 aa15.97■□□□□ 0.15
SIX3-201ENST00000260653 TRGV2A0A075B6R0 118 aa15.97■□□□□ 0.15
SIX3-201ENST00000260653 hDV102S1A0JD36 115 aa15.97■□□□□ 0.15
SIX3-201ENST00000260653 I3L3M4 83 aa15.97■□□□□ 0.15
SIX3-201ENST00000260653 TSHBP01222 138 aa15.97■□□□□ 0.15
SIX3-201ENST00000260653 SCGB3A1Q96QR1 104 aa15.97■□□□□ 0.15
SIX3-201ENST00000260653 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.96■□□□□ 0.14
SIX3-201ENST00000260653 DKK2Q9UBU2 259 aa15.96■□□□□ 0.14
SIX3-201ENST00000260653 TP53TG1Q9Y2A0 90 aa15.96■□□□□ 0.14
SIX3-201ENST00000260653 RPL39P62891 51 aaKnown RBP15.95■□□□□ 0.14
SIX3-201ENST00000260653 CYSLTR1Q9Y271 337 aa15.95■□□□□ 0.14
SIX3-201ENST00000260653 BOD1L2Q8IYS8 172 aa15.95■□□□□ 0.14
SIX3-201ENST00000260653 EGFEM1PQ0D2K5 195 aa15.93■□□□□ 0.14
SIX3-201ENST00000260653 SMIM9A6NGZ8 99 aa15.93■□□□□ 0.14
SIX3-201ENST00000260653 RHOHQ15669 191 aa15.93■□□□□ 0.14
SIX3-201ENST00000260653 ANK2Q01484 3957 aa15.92■□□□□ 0.14
SIX3-201ENST00000260653 Q6ZN92 141 aa15.92■□□□□ 0.14
SIX3-201ENST00000260653 ERASQ7Z444 233 aa15.92■□□□□ 0.14
SIX3-201ENST00000260653 SLC25A29Q8N8R3 303 aa15.91■□□□□ 0.14
SIX3-201ENST00000260653 DNAJC30Q96LL9 226 aa15.91■□□□□ 0.14
SIX3-201ENST00000260653 NOTCH1P46531 2555 aa15.91■□□□□ 0.14
SIX3-201ENST00000260653 K7EQD1 137 aa15.91■□□□□ 0.14
SIX3-201ENST00000260653 OR11H2Q8NH07 326 aa15.91■□□□□ 0.14
SIX3-201ENST00000260653 Q6ZVH6 145 aa15.9■□□□□ 0.14
SIX3-201ENST00000260653 IGHV3-38A0A0C4DH36 116 aa15.9■□□□□ 0.14
SIX3-201ENST00000260653 IGLC3P0DOY3 106 aa15.9■□□□□ 0.14
SIX3-201ENST00000260653 DEFB130BP0DP73 79 aa15.9■□□□□ 0.14
SIX3-201ENST00000260653 DEFB130AP0DP74 79 aa15.9■□□□□ 0.14
SIX3-201ENST00000260653 CKS1BP61024 79 aa15.9■□□□□ 0.14
SIX3-201ENST00000260653 PHLDA1Q8WV24 401 aaPredicted RBP15.9■□□□□ 0.14
SIX3-201ENST00000260653 G3V4G9 280 aa15.89■□□□□ 0.13
SIX3-201ENST00000260653 BAALCQ8WXS3 180 aa15.89■□□□□ 0.13
SIX3-201ENST00000260653 IGIPA6NJ69 53 aa15.89■□□□□ 0.13
SIX3-201ENST00000260653 ZNRF2Q8NHG8 242 aa15.89■□□□□ 0.13
SIX3-201ENST00000260653 ZMAT4Q9H898 229 aa15.89■□□□□ 0.13
SIX3-201ENST00000260653 C20orf203Q8NBC4 194 aa15.88■□□□□ 0.13
SIX3-201ENST00000260653 MRPL35Q9NZE8 188 aaKnown RBP15.88■□□□□ 0.13
SIX3-201ENST00000260653 DEFB4AO15263 64 aa15.88■□□□□ 0.13
SIX3-201ENST00000260653 A0A087WX48 190 aa15.87■□□□□ 0.13
SIX3-201ENST00000260653 TRBV7-3A0A075B6L6 115 aa15.87■□□□□ 0.13
SIX3-201ENST00000260653 LINC01549A6NIU2 74 aa15.87■□□□□ 0.13
SIX3-201ENST00000260653 LINC00612Q8N6U2 182 aa15.87■□□□□ 0.13
SIX3-201ENST00000260653 TRBV10-1A0A0K0K1A3 114 aa15.86■□□□□ 0.13
SIX3-201ENST00000260653 TRGV4A0A0C4DH28 118 aa15.86■□□□□ 0.13
SIX3-201ENST00000260653 IGHV4-28A0A0C4DH34 117 aa15.86■□□□□ 0.13
SIX3-201ENST00000260653 DNAH3Q8TD57 4116 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 TRAV12-1A0A0B4J245 112 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 SIVA1O15304 175 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 FAM222AQ5U5X8 452 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 RNF183Q96D59 192 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 TIMM17AQ99595 171 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 IGKCP01834 107 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 TCTAP57738 103 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 RPL36AP83881 106 aaKnown RBP15.85■□□□□ 0.13
SIX3-201ENST00000260653 VAMP3Q15836 100 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 RPL36ALQ969Q0 106 aaKnown RBP15.85■□□□□ 0.13
SIX3-201ENST00000260653 TP73-AS1Q9UF72 201 aa15.85■□□□□ 0.13
SIX3-201ENST00000260653 DPM2O94777 84 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 FHL2Q14192 279 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 GAGE12JA6NER3 117 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 GAGE4Q13068 117 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 GAGE5Q13069 117 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 GAGE13Q4V321 117 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 ZC2HC1BQ5TFG8 222 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 Q8NAQ8 132 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 UQCR10Q9UDW1 63 aa15.84■□□□□ 0.13
SIX3-201ENST00000260653 LOC100131303A0A0U1RQF7 123 aa15.83■□□□□ 0.12
SIX3-201ENST00000260653 TMEM141Q96I45 108 aa15.83■□□□□ 0.12
SIX3-201ENST00000260653 NBEAL1Q6ZS30 2694 aa15.83■□□□□ 0.12
SIX3-201ENST00000260653 TRBV6-4A0A1B0GX49 114 aa15.83■□□□□ 0.12
SIX3-201ENST00000260653 PRSS29PA6NIE9 313 aa15.83■□□□□ 0.12
SIX3-201ENST00000260653 OPRPNQ99935 248 aaPredicted RBP15.83■□□□□ 0.12
SIX3-201ENST00000260653 CHCHD7Q9BUK0 85 aa15.83■□□□□ 0.12
SIX3-201ENST00000260653 HHLA3Q9XRX5 114 aa15.82■□□□□ 0.12
SIX3-201ENST00000260653 F8VRH5 84 aa15.82■□□□□ 0.12
SIX3-201ENST00000260653 TSPAN13O95857 204 aa15.82■□□□□ 0.12
SIX3-201ENST00000260653 MIFP14174 115 aa15.81■□□□□ 0.12
SIX3-201ENST00000260653 UBE2D3P61077 147 aa15.81■□□□□ 0.12
SIX3-201ENST00000260653 UBE2D2P62837 147 aa15.81■□□□□ 0.12
SIX3-201ENST00000260653 LYRM9A8MSI8 78 aa15.81■□□□□ 0.12
SIX3-201ENST00000260653 SS18L2Q9UHA2 77 aa15.8■□□□□ 0.12
SIX3-201ENST00000260653 A8MZ25 164 aa15.79■□□□□ 0.12
SIX3-201ENST00000260653 SAMD5Q5TGI4 173 aa15.79■□□□□ 0.12
SIX3-201ENST00000260653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.79■□□□□ 0.12
SIX3-201ENST00000260653 IGKV2-29A2NJV5 120 aaPredicted RBP15.79■□□□□ 0.12
SIX3-201ENST00000260653 PLNP26678 52 aa15.78■□□□□ 0.12
SIX3-201ENST00000260653 VCX2Q9H322 139 aa15.78■□□□□ 0.12
SIX3-201ENST00000260653 PMVKQ15126 192 aa15.78■□□□□ 0.12
SIX3-201ENST00000260653 CEMP1Q6PRD7 247 aaPredicted RBP15.78■□□□□ 0.12
SIX3-201ENST00000260653 DAZ4Q86SG3 579 aaKnown RBP15.78■□□□□ 0.12
SIX3-201ENST00000260653 DAZ3Q9NR90 486 aaKnown RBP15.78■□□□□ 0.12
SIX3-201ENST00000260653 CELA1Q9UNI1 258 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms