RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 CEMP1Q6PRD7 247 aaPredicted RBP17.04■□□□□ 0.32
PREB-201ENST00000260643 C10orf99Q6UWK7 81 aa17.04■□□□□ 0.32
PREB-201ENST00000260643 CCL19Q99731 98 aa17.04■□□□□ 0.32
PREB-201ENST00000260643 CRLF1O75462 422 aa17.04■□□□□ 0.32
PREB-201ENST00000260643 IFITM1P13164 125 aa17.03■□□□□ 0.32
PREB-201ENST00000260643 SYNJ2BPP57105 145 aa17.03■□□□□ 0.32
PREB-201ENST00000260643 PROK1P58294 105 aa17.03■□□□□ 0.32
PREB-201ENST00000260643 C2orf82Q6UX34 121 aa17.03■□□□□ 0.32
PREB-201ENST00000260643 TMEM61Q8N0U2 210 aa17.03■□□□□ 0.32
PREB-201ENST00000260643 COL6A6A6NMZ7 2263 aa17.02■□□□□ 0.32
PREB-201ENST00000260643 NDUFV3P56181 108 aaKnown RBP17.02■□□□□ 0.32
PREB-201ENST00000260643 MRPL23Q16540 153 aaKnown RBP17.02■□□□□ 0.32
PREB-201ENST00000260643 DEFB121Q5J5C9 76 aa17.02■□□□□ 0.31
PREB-201ENST00000260643 NCOR2Q9Y618 2525 aa17.02■□□□□ 0.31
PREB-201ENST00000260643 LST1O00453 97 aa17.01■□□□□ 0.31
PREB-201ENST00000260643 IGHV3-73A0A0B4J1V6 119 aa17.01■□□□□ 0.31
PREB-201ENST00000260643 SPTAN1Q13813 2472 aaKnown RBP17■□□□□ 0.31
PREB-201ENST00000260643 B4DSR2 109 aa17■□□□□ 0.31
PREB-201ENST00000260643 IGF2RP11717 2491 aa17■□□□□ 0.31
PREB-201ENST00000260643 FAM240AA0A1B0GVK7 77 aa16.99■□□□□ 0.31
PREB-201ENST00000260643 IGHV4-59P01825 116 aa16.99■□□□□ 0.31
PREB-201ENST00000260643 IGLV5-45A0A087WSX0 123 aa16.98■□□□□ 0.31
PREB-201ENST00000260643 ATP5J2P56134 94 aa16.98■□□□□ 0.31
PREB-201ENST00000260643 LY6DQ14210 128 aa16.98■□□□□ 0.31
PREB-201ENST00000260643 RNASE13Q5GAN3 156 aaKnown RBP16.98■□□□□ 0.31
PREB-201ENST00000260643 AKAP6Q13023 2319 aa16.98■□□□□ 0.31
PREB-201ENST00000260643 DNAJC30Q96LL9 226 aa16.98■□□□□ 0.31
PREB-201ENST00000260643 TIRAPP58753 221 aa16.97■□□□□ 0.31
PREB-201ENST00000260643 Q6ZSN1 163 aa16.97■□□□□ 0.31
PREB-201ENST00000260643 C15orf53Q8NAA6 179 aa16.97■□□□□ 0.31
PREB-201ENST00000260643 HOXD3P31249 432 aaPredicted RBP16.96■□□□□ 0.31
PREB-201ENST00000260643 A8MZ25 164 aa16.96■□□□□ 0.31
PREB-201ENST00000260643 NDUFA1O15239 70 aa16.96■□□□□ 0.31
PREB-201ENST00000260643 DEFB112Q30KQ8 113 aa16.96■□□□□ 0.31
PREB-201ENST00000260643 TTC32Q5I0X7 151 aa16.96■□□□□ 0.31
PREB-201ENST00000260643 Q9UF83 564 aa16.96■□□□□ 0.31
PREB-201ENST00000260643 CELSR1Q9NYQ6 3014 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 GNLYP22749 145 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 PRRC2AP48634 2157 aaKnown RBP16.95■□□□□ 0.3
PREB-201ENST00000260643 CACNA1AO00555 2505 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 KNCNA6PVL3 124 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 ZNF415Q09FC8 603 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 UBE2E2Q96LR5 201 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 LINC00467Q9BRT7 94 aa16.95■□□□□ 0.3
PREB-201ENST00000260643 Q6ZSV7 163 aa16.94■□□□□ 0.3
PREB-201ENST00000260643 CLEC2BQ92478 149 aa16.94■□□□□ 0.3
PREB-201ENST00000260643 DOPEY2Q9Y3R5 2298 aa16.94■□□□□ 0.3
PREB-201ENST00000260643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.94■□□□□ 0.3
PREB-201ENST00000260643 IGKV2-29A2NJV5 120 aaPredicted RBP16.94■□□□□ 0.3
PREB-201ENST00000260643 IGHV3-53P01767 116 aa16.94■□□□□ 0.3
PREB-201ENST00000260643 DUX3Q96PT4 197 aa16.93■□□□□ 0.3
PREB-201ENST00000260643 RBMY1BA6NDE4 496 aaKnown RBP16.92■□□□□ 0.3
PREB-201ENST00000260643 RBMY1EA6NEQ0 496 aaKnown RBP16.92■□□□□ 0.3
PREB-201ENST00000260643 RBMY1DP0C7P1 496 aaKnown RBP16.92■□□□□ 0.3
PREB-201ENST00000260643 HTN1P15515 57 aa16.92■□□□□ 0.3
PREB-201ENST00000260643 CHD8Q9HCK8 2581 aa16.92■□□□□ 0.3
PREB-201ENST00000260643 DUX5Q96PT3 197 aa16.92■□□□□ 0.3
PREB-201ENST00000260643 CDKN2A-AS1Q9UH64 79 aa16.92■□□□□ 0.3
PREB-201ENST00000260643 GAGE12JA6NER3 117 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 GAGE7O76087 117 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 GAGE12FP0CL80 117 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 GAGE12GP0CL81 117 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 GAGE12IP0CL82 117 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 DEFB131AP59861 70 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 GAGE4Q13068 117 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 BEAN1Q3B7T3 259 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 PRORYQ9H606 182 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 NPC2P61916 151 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 TMEM101Q96IK0 257 aa16.91■□□□□ 0.3
PREB-201ENST00000260643 B5MCH6 92 aa16.89■□□□□ 0.3
PREB-201ENST00000260643 C11orf72Q8NBR9 251 aa16.89■□□□□ 0.3
PREB-201ENST00000260643 CITED2Q99967 270 aaPredicted RBP16.89■□□□□ 0.3
PREB-201ENST00000260643 VPS13CQ709C8 3753 aa16.89■□□□□ 0.29
PREB-201ENST00000260643 IGLV5-39A0A0G2JS06 123 aa16.89■□□□□ 0.29
PREB-201ENST00000260643 CIRBPQ14011 172 aaKnown RBP16.88■□□□□ 0.29
PREB-201ENST00000260643 SS18L2Q9UHA2 77 aa16.88■□□□□ 0.29
PREB-201ENST00000260643 FAM19A3Q7Z5A8 133 aa16.88■□□□□ 0.29
PREB-201ENST00000260643 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.87■□□□□ 0.29
PREB-201ENST00000260643 RS1O15537 224 aa16.87■□□□□ 0.29
PREB-201ENST00000260643 PRM2P04554 102 aa16.87■□□□□ 0.29
PREB-201ENST00000260643 LINC00308Q8TCZ7 52 aa16.87■□□□□ 0.29
PREB-201ENST00000260643 NACAE9PAV3 2078 aa16.86■□□□□ 0.29
PREB-201ENST00000260643 DSCR9P59020 149 aa16.86■□□□□ 0.29
PREB-201ENST00000260643 ZNF702PQ9H963 129 aa16.85■□□□□ 0.29
PREB-201ENST00000260643 HERVK_113P63121 156 aa16.85■□□□□ 0.29
PREB-201ENST00000260643 VPREB3Q9UKI3 123 aa16.85■□□□□ 0.29
PREB-201ENST00000260643 TRBV7-7A0A0K0K1E9 115 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 CCDC179H3BU77 68 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 DAND5Q8N907 189 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 IGHV3OR16-12A0A075B7B8 117 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 IGHV3-38A0A0C4DH36 116 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 LINC01356Q8N9X3 169 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 COPS9Q8WXC6 57 aa16.84■□□□□ 0.29
PREB-201ENST00000260643 J3QLI3 93 aa16.83■□□□□ 0.28
PREB-201ENST00000260643 COX7A2LO14548 114 aa16.82■□□□□ 0.28
PREB-201ENST00000260643 COX6A2Q02221 97 aa16.82■□□□□ 0.28
PREB-201ENST00000260643 ACYP1P07311 99 aa16.82■□□□□ 0.28
PREB-201ENST00000260643 LINC00242Q5T6M2 205 aa16.82■□□□□ 0.28
PREB-201ENST00000260643 SHISA2Q6UWI4 295 aa16.82■□□□□ 0.28
PREB-201ENST00000260643 PPDPFQ9H3Y8 114 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms