RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 DOPEY1Q5JWR5 2465 aa12.46□□□□□ -0.41
SLC52A1-201ENST00000254853 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 CRYBA4P53673 196 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 XGP55808 180 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 Q1RN00 199 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 A0A1B0GV72 72 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 SPINK8P0C7L1 97 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 Q6YL49 198 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
SLC52A1-201ENST00000254853 A8MTW9 85 aa12.44□□□□□ -0.42
SLC52A1-201ENST00000254853 Q5PR19 223 aa12.44□□□□□ -0.42
SLC52A1-201ENST00000254853 Q6ZUT4 128 aa12.44□□□□□ -0.42
SLC52A1-201ENST00000254853 CSMD2Q7Z408 3487 aa12.44□□□□□ -0.42
SLC52A1-201ENST00000254853 IGHV1-58A0A0C4DH39 117 aa12.44□□□□□ -0.42
SLC52A1-201ENST00000254853 EPG5Q9HCE0 2579 aa12.44□□□□□ -0.42
SLC52A1-201ENST00000254853 FLNCQ14315 2725 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 IGKV2-29A2NJV5 120 aaPredicted RBP12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 A8MZ25 164 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 USP9XQ93008 2570 aaPredicted RBP12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 CKS1BP61024 79 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 NDUFA12Q9UI09 145 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 UBE2D4Q9Y2X8 147 aa12.43□□□□□ -0.42
SLC52A1-201ENST00000254853 PRSS2P07478 247 aa12.42□□□□□ -0.42
SLC52A1-201ENST00000254853 TMEM61Q8N0U2 210 aa12.42□□□□□ -0.42
SLC52A1-201ENST00000254853 CREBBPQ92793 2442 aa12.42□□□□□ -0.42
SLC52A1-201ENST00000254853 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 IGHV3-38A0A0C4DH36 116 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 TINCRA0A1B0GVN0 87 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 FSHBP01225 129 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 LINC00467Q9BRT7 94 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 SPANXA1Q9NS26 97 aa12.41□□□□□ -0.42
SLC52A1-201ENST00000254853 UTP20O75691 2785 aaKnown RBP12.4□□□□□ -0.42
SLC52A1-201ENST00000254853 M0QXV9 152 aa12.4□□□□□ -0.42
SLC52A1-201ENST00000254853 ATXN8Q156A1 80 aa12.4□□□□□ -0.42
SLC52A1-201ENST00000254853 LINC01587Q99440 93 aa12.4□□□□□ -0.42
SLC52A1-201ENST00000254853 PRRC2AP48634 2157 aaKnown RBP12.4□□□□□ -0.43
SLC52A1-201ENST00000254853 TRIAP1O43715 76 aa12.4□□□□□ -0.43
SLC52A1-201ENST00000254853 C11orf72Q8NBR9 251 aa12.4□□□□□ -0.43
SLC52A1-201ENST00000254853 USP9YO00507 2555 aaPredicted RBP12.4□□□□□ -0.43
SLC52A1-201ENST00000254853 NPC2P61916 151 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 LINC01620Q4KN68 170 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 PIK3CD-AS1Q5SR53 167 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 SPANXCQ9NY87 97 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 ZANQ9Y493 2812 aa12.39□□□□□ -0.43
SLC52A1-201ENST00000254853 TRBV30A0A0K0K1B3 111 aa12.38□□□□□ -0.43
SLC52A1-201ENST00000254853 HIST2H2BDQ6DRA6 164 aa12.38□□□□□ -0.43
SLC52A1-201ENST00000254853 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 MIAQ16674 131 aa12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 USP24Q9UPU5 2620 aa12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 IGHV4-31P0DP07 118 aa12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 Q6ZSV7 163 aa12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
SLC52A1-201ENST00000254853 GEMIN7Q9H840 131 aaKnown RBP12.36□□□□□ -0.43
SLC52A1-201ENST00000254853 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
SLC52A1-201ENST00000254853 TMEM262E9PQX1 116 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 DNAJC30Q96LL9 226 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 CDKN2A-AS1Q9UH64 79 aa12.35□□□□□ -0.43
SLC52A1-201ENST00000254853 RS1O15537 224 aa12.34□□□□□ -0.43
SLC52A1-201ENST00000254853 POLQO75417 2590 aa12.34□□□□□ -0.43
SLC52A1-201ENST00000254853 ANKRD17O75179 2603 aaKnown RBP12.34□□□□□ -0.43
SLC52A1-201ENST00000254853 KMT2BQ9UMN6 2715 aaPredicted RBP12.34□□□□□ -0.43
SLC52A1-201ENST00000254853 TRBV10-2A0A0K0K1G8 114 aa12.34□□□□□ -0.43
SLC52A1-201ENST00000254853 INSP01308 110 aa12.34□□□□□ -0.43
SLC52A1-201ENST00000254853 DEFB114Q30KQ6 69 aa12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 Q8N2B8 174 aa12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 C4orf3Q8WVX3 66 aa12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 DAND5Q8N907 189 aa12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 FBN2P35556 2912 aa12.33□□□□□ -0.44
SLC52A1-201ENST00000254853 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
SLC52A1-201ENST00000254853 MXRA5Q9NR99 2828 aa12.32□□□□□ -0.44
SLC52A1-201ENST00000254853 TEX49A0A1B0GTD5 131 aa12.32□□□□□ -0.44
SLC52A1-201ENST00000254853 TMEM101Q96IK0 257 aa12.32□□□□□ -0.44
SLC52A1-201ENST00000254853 XCL2Q9UBD3 114 aa12.32□□□□□ -0.44
SLC52A1-201ENST00000254853 TIRAPP58753 221 aa12.31□□□□□ -0.44
SLC52A1-201ENST00000254853 COX6A2Q02221 97 aa12.31□□□□□ -0.44
SLC52A1-201ENST00000254853 YAE1D1Q9NRH1 226 aa12.31□□□□□ -0.44
SLC52A1-201ENST00000254853 IGLV5-45A0A087WSX0 123 aa12.3□□□□□ -0.44
SLC52A1-201ENST00000254853 DGAT2L7PQ6IED9 249 aa12.3□□□□□ -0.44
SLC52A1-201ENST00000254853 TIMM17BO60830 172 aa12.3□□□□□ -0.44
SLC52A1-201ENST00000254853 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
SLC52A1-201ENST00000254853 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
SLC52A1-201ENST00000254853 H7C423 109 aa12.29□□□□□ -0.44
SLC52A1-201ENST00000254853 NDUFA1O15239 70 aa12.29□□□□□ -0.44
SLC52A1-201ENST00000254853 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
SLC52A1-201ENST00000254853 CR1P17927 2039 aa12.29□□□□□ -0.44
SLC52A1-201ENST00000254853 C2orf82Q6UX34 121 aa12.29□□□□□ -0.44
SLC52A1-201ENST00000254853 RNF183Q96D59 192 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms