RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 XCL2Q9UBD3 114 aa8.28□□□□□ -1.08
CLUHP3-201ENST00000254109 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
CLUHP3-201ENST00000254109 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.09
CLUHP3-201ENST00000254109 TAL2Q16559 108 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 C9orf66Q5T8R8 295 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 CFAP126Q5VTH2 177 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 UFSP1Q6NVU6 142 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 C20orf203Q8NBC4 194 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 SMIM13P0DJ93 91 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 BEAN1Q3B7T3 259 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 CEND1Q8N111 149 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 OR4C5Q8NGB2 326 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
CLUHP3-201ENST00000254109 IGLV4-69A0A075B6H9 119 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 IGHV3OR16-12A0A075B7B8 117 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 P0DMU3 169 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 DNAJC30Q96LL9 226 aa8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 MRPL16Q9NX20 251 aaKnown RBP8.25□□□□□ -1.09
CLUHP3-201ENST00000254109 RS1O15537 224 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 HIST1H4GQ99525 98 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 TM2D2Q9BX73 214 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 INSL3P51460 131 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 EMP1P54849 157 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 C1orf158Q8N1D5 194 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 VCX2Q9H322 139 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 ANK2Q01484 3957 aa8.24□□□□□ -1.09
CLUHP3-201ENST00000254109 ZNF815PA8K554 130 aa8.23□□□□□ -1.09
CLUHP3-201ENST00000254109 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
CLUHP3-201ENST00000254109 AZU1P20160 251 aa8.23□□□□□ -1.09
CLUHP3-201ENST00000254109 FXYD2P54710 66 aa8.23□□□□□ -1.09
CLUHP3-201ENST00000254109 FAM110AQ9BQ89 295 aa8.23□□□□□ -1.09
CLUHP3-201ENST00000254109 PKD1L1Q8TDX9 2849 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 H3BUT2 72 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 SCGB1D4Q6XE38 83 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 GTF2H5Q6ZYL4 71 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 IGLV4-3A0A075B6K6 122 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 TRGV1A0A0A0MS02 117 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 GAGE10A6NGK3 116 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 KRTAP21-3Q3LHN1 58 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 Q6ZSN1 163 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 NFE4Q86UQ8 179 aa8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
CLUHP3-201ENST00000254109 CMYA5Q8N3K9 4069 aa8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 G3V4G9 280 aa8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 ZNRF2Q8NHG8 242 aa8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 RNASE8Q8TDE3 154 aaKnown RBP8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 TMEM263Q8WUH6 116 aaKnown RBP8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 NHP2Q9NX24 153 aaKnown RBP8.21□□□□□ -1.1
CLUHP3-201ENST00000254109 WIPF1O43516 503 aa8.2□□□□□ -1.1
CLUHP3-201ENST00000254109 CRYBA4P53673 196 aa8.2□□□□□ -1.1
CLUHP3-201ENST00000254109 COTL1Q14019 142 aa8.2□□□□□ -1.1
CLUHP3-201ENST00000254109 IL17DQ8TAD2 202 aa8.2□□□□□ -1.1
CLUHP3-201ENST00000254109 C1QTNF4Q9BXJ3 329 aa8.2□□□□□ -1.1
CLUHP3-201ENST00000254109 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 K7EP13 123 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 KRTAP10-11P60412 298 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 A0A1W2PPM0 123 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 FABP2P12104 132 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 RPL35AP18077 110 aaKnown RBP8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 CBY1Q9Y3M2 126 aa8.19□□□□□ -1.1
CLUHP3-201ENST00000254109 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 AMELXQ99217 191 aa8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 CHCHD7Q9BUK0 85 aa8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 Q9UF83 564 aa8.18□□□□□ -1.1
CLUHP3-201ENST00000254109 TRAV4A0A0B4J268 109 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 J3QQQ9 107 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 K7EP34 96 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 K7ERJ3 54 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 LEPROTO15243 131 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 C12orf74Q32Q52 190 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 PHLDA1Q8WV24 401 aaPredicted RBP8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 A0A0J9YXV3 536 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 TRBV10-1A0A0K0K1A3 114 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 GIG44P09565 113 aaPredicted RBP8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 DAZ2Q13117 558 aaKnown RBP8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 Q6ZTI0 123 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms