RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 Q6ZUT4 128 aa12.91□□□□□ -0.34
SLC1A4-201ENST00000234256 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
SLC1A4-201ENST00000234256 VSIG2Q96IQ7 327 aa12.91□□□□□ -0.34
SLC1A4-201ENST00000234256 CFAP54Q96N23 3096 aa12.91□□□□□ -0.34
SLC1A4-201ENST00000234256 NKAPP1Q8N9T2 125 aa12.9□□□□□ -0.34
SLC1A4-201ENST00000234256 Q6ZS46 218 aa12.9□□□□□ -0.34
SLC1A4-201ENST00000234256 MRAPQ8TCY5 172 aa12.9□□□□□ -0.34
SLC1A4-201ENST00000234256 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
SLC1A4-201ENST00000234256 CENPEQ02224 2701 aa12.89□□□□□ -0.35
SLC1A4-201ENST00000234256 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
SLC1A4-201ENST00000234256 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
SLC1A4-201ENST00000234256 K7EQG2 157 aa12.89□□□□□ -0.35
SLC1A4-201ENST00000234256 Q6ZTI0 123 aa12.89□□□□□ -0.35
SLC1A4-201ENST00000234256 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 F8WEM9 126 aa12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 FOXI1Q12951 378 aa12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 PRM2P04554 102 aa12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
SLC1A4-201ENST00000234256 C11orf71Q6IPW1 123 aa12.87□□□□□ -0.35
SLC1A4-201ENST00000234256 PROK1P58294 105 aa12.87□□□□□ -0.35
SLC1A4-201ENST00000234256 HERV-K104P63124 156 aa12.87□□□□□ -0.35
SLC1A4-201ENST00000234256 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
SLC1A4-201ENST00000234256 PRR9Q5T870 116 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 NDUFA11Q86Y39 141 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 HHLA3Q9XRX5 114 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 TNRC6BQ9UPQ9 1833 aaKnown RBP12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 MIR7-3HGQ8N6C7 128 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 IGHV1-58A0A0C4DH39 117 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 IGHV3-30P01768 117 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 IGHV3-33P01772 117 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 IGHV3-30-5P0DP03 117 aa12.86□□□□□ -0.35
SLC1A4-201ENST00000234256 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
SLC1A4-201ENST00000234256 TRIOO75962 3097 aa12.85□□□□□ -0.35
SLC1A4-201ENST00000234256 COX7B2Q8TF08 81 aa12.85□□□□□ -0.35
SLC1A4-201ENST00000234256 TMEM126AQ9H061 195 aa12.85□□□□□ -0.35
SLC1A4-201ENST00000234256 F8P00451 2351 aa12.85□□□□□ -0.35
SLC1A4-201ENST00000234256 NEXN-AS1Q8NBZ9 246 aa12.84□□□□□ -0.35
SLC1A4-201ENST00000234256 BPTFQ12830 3046 aa12.84□□□□□ -0.35
SLC1A4-201ENST00000234256 DSCR8Q96T75 97 aa12.84□□□□□ -0.35
SLC1A4-201ENST00000234256 G3V4G9 280 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 TCL1BO95988 128 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 ATP5G1P05496 136 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 WFDC11Q8NEX6 87 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 DEFB105AQ8NG35 78 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 CDH23Q9H251 3354 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 COX7A2LO14548 114 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 LECT2O14960 151 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 FSTL3O95633 263 aa12.83□□□□□ -0.36
SLC1A4-201ENST00000234256 Q8N6K4 173 aa12.82□□□□□ -0.36
SLC1A4-201ENST00000234256 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
SLC1A4-201ENST00000234256 LGALS9O00182 355 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 A0A0J9YXY3 114 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 URB1-AS1Q96HZ7 61 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 ORMDL1Q9P0S3 153 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 ANKRD17O75179 2603 aaKnown RBP12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 MRPL23Q16540 153 aaKnown RBP12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 C2orf91Q6ZV80 131 aa12.81□□□□□ -0.36
SLC1A4-201ENST00000234256 MUC4Q99102 2169 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 TM2D2Q9BX73 214 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 A8MZ25 164 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 NFE4Q86UQ8 179 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 CAMK2N2Q96S95 79 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 C4orf3Q8WVX3 66 aa12.8□□□□□ -0.36
SLC1A4-201ENST00000234256 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
SLC1A4-201ENST00000234256 M0QY20 66 aa12.79□□□□□ -0.36
SLC1A4-201ENST00000234256 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
SLC1A4-201ENST00000234256 IGLV4-3A0A075B6K6 122 aa12.79□□□□□ -0.36
SLC1A4-201ENST00000234256 NRACQ8N912 160 aa12.79□□□□□ -0.36
SLC1A4-201ENST00000234256 SS18L2Q9UHA2 77 aa12.79□□□□□ -0.36
SLC1A4-201ENST00000234256 RPL32P62910 135 aaKnown RBP12.78□□□□□ -0.36
SLC1A4-201ENST00000234256 DEFB114Q30KQ6 69 aa12.78□□□□□ -0.36
SLC1A4-201ENST00000234256 C9orf66Q5T8R8 295 aa12.78□□□□□ -0.36
SLC1A4-201ENST00000234256 U3KQK5 164 aa12.78□□□□□ -0.36
SLC1A4-201ENST00000234256 TRBV10-2A0A0K0K1G8 114 aa12.77□□□□□ -0.36
SLC1A4-201ENST00000234256 A0A1W2PPR1 153 aa12.77□□□□□ -0.37
SLC1A4-201ENST00000234256 Q8N976 141 aa12.77□□□□□ -0.37
SLC1A4-201ENST00000234256 H0YGX0 51 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 PRORYQ9H606 182 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 AGRNO00468 2067 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 CLPSL1A2RUU4 121 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 AVPP01185 164 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 IGHV4-31P0DP07 118 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
SLC1A4-201ENST00000234256 FAM236AA0A1B0GUQ0 79 aa12.75□□□□□ -0.37
SLC1A4-201ENST00000234256 FAM236BA0A1B0GV22 79 aa12.75□□□□□ -0.37
SLC1A4-201ENST00000234256 EDN2P20800 178 aa12.75□□□□□ -0.37
SLC1A4-201ENST00000234256 C18orf65Q6ZTR6 163 aa12.75□□□□□ -0.37
SLC1A4-201ENST00000234256 Q6YL49 198 aa12.75□□□□□ -0.37
SLC1A4-201ENST00000234256 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms