RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 V9GYV3 84 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 M0R381 172 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 CIDEAO60543 219 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 GNG4P50150 75 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-201ENST00000230480 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 SMIM12Q96EX1 92 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-201ENST00000230480 TNFRSF18Q9Y5U5 241 aa9.33□□□□□ -0.92
VEGFA-201ENST00000230480 RYR1P21817 5038 aa9.32□□□□□ -0.92
VEGFA-201ENST00000230480 CCL25O15444 150 aa9.32□□□□□ -0.92
VEGFA-201ENST00000230480 MGST1P10620 155 aaKnown RBP9.32□□□□□ -0.92
VEGFA-201ENST00000230480 TIRAPP58753 221 aa9.32□□□□□ -0.92
VEGFA-201ENST00000230480 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
VEGFA-201ENST00000230480 PHLDA3Q9Y5J5 127 aa9.32□□□□□ -0.92
VEGFA-201ENST00000230480 TRAV9-2A0A087WT02 112 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 SRIP30626 198 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 TNP2Q05952 138 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 NIT1Q86X76 327 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 RNASE7Q9H1E1 156 aaKnown RBP9.31□□□□□ -0.92
VEGFA-201ENST00000230480 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
VEGFA-201ENST00000230480 RHOHQ15669 191 aa9.3□□□□□ -0.92
VEGFA-201ENST00000230480 C1orf134Q5TEV5 83 aa9.3□□□□□ -0.92
VEGFA-201ENST00000230480 GTSF1Q8WW33 167 aa9.3□□□□□ -0.92
VEGFA-201ENST00000230480 SMIM27A0A1W2PRY6 76 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 SIVA1O15304 175 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 Q8N3U1 123 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
VEGFA-201ENST00000230480 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 F2Z2F3 143 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 PMCHP20382 165 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 GAGE4Q13068 117 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 GAGE5Q13069 117 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 TSKUQ8WUA8 353 aa9.28□□□□□ -0.92
VEGFA-201ENST00000230480 APCSP02743 223 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
VEGFA-201ENST00000230480 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 FAM231DQ6ZW35 169 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 FER1L6-AS1Q8NA97 138 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 ATP6V0E2Q8NHE4 81 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 PRADC1Q9BSG0 188 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 CNFNQ9BYD5 112 aa9.27□□□□□ -0.93
VEGFA-201ENST00000230480 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
VEGFA-201ENST00000230480 RHODO00212 210 aa9.26□□□□□ -0.93
VEGFA-201ENST00000230480 P01737 135 aa9.26□□□□□ -0.93
VEGFA-201ENST00000230480 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
VEGFA-201ENST00000230480 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
VEGFA-201ENST00000230480 EVI2AP22794 236 aa9.25□□□□□ -0.93
VEGFA-201ENST00000230480 HINT1P49773 126 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-201ENST00000230480 UBE2D3P61077 147 aa9.25□□□□□ -0.93
VEGFA-201ENST00000230480 UBE2D2P62837 147 aa9.25□□□□□ -0.93
VEGFA-201ENST00000230480 LELP1Q5T871 98 aa9.25□□□□□ -0.93
VEGFA-201ENST00000230480 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
VEGFA-201ENST00000230480 C18orf32Q8TCD1 76 aa9.25□□□□□ -0.93
VEGFA-201ENST00000230480 DAZAP1Q96EP5 407 aaKnown RBP9.25□□□□□ -0.93
VEGFA-201ENST00000230480 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
VEGFA-201ENST00000230480 HSBP1O75506 76 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 NTF3P20783 257 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-201ENST00000230480 SPANXN1Q5VSR9 72 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 DNAH8Q96JB1 4490 aa9.24□□□□□ -0.93
VEGFA-201ENST00000230480 HSPG2P98160 4391 aa9.23□□□□□ -0.93
VEGFA-201ENST00000230480 M0QY20 66 aa9.23□□□□□ -0.93
VEGFA-201ENST00000230480 LINC01556Q5JQF7 62 aa9.23□□□□□ -0.93
VEGFA-201ENST00000230480 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
VEGFA-201ENST00000230480 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
VEGFA-201ENST00000230480 K7ERU9 68 aa9.22□□□□□ -0.93
VEGFA-201ENST00000230480 VAMP3Q15836 100 aa9.22□□□□□ -0.93
VEGFA-201ENST00000230480 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
VEGFA-201ENST00000230480 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
VEGFA-201ENST00000230480 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
VEGFA-201ENST00000230480 TPPP3Q9BW30 176 aa9.22□□□□□ -0.93
VEGFA-201ENST00000230480 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 IGHV3-38A0A0C4DH36 116 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 CACNG7P62955 275 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 OCIAD2Q56VL3 154 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 TMEM191AQ9H0A3 160 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 CST9LQ9H4G1 147 aa9.21□□□□□ -0.94
VEGFA-201ENST00000230480 IBA57-AS1B1ANH7 110 aa9.2□□□□□ -0.94
VEGFA-201ENST00000230480 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
VEGFA-201ENST00000230480 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
VEGFA-201ENST00000230480 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
VEGFA-201ENST00000230480 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
VEGFA-201ENST00000230480 CT83Q5H943 113 aa9.2□□□□□ -0.94
VEGFA-201ENST00000230480 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
VEGFA-201ENST00000230480 SLC25A34Q6PIV7 304 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms