RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 MRPS12O15235 138 aaKnown RBP12.93□□□□□ -0.34
ITGB4-201ENST00000200181 C3orf84H3BNL1 204 aa12.93□□□□□ -0.34
ITGB4-201ENST00000200181 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
ITGB4-201ENST00000200181 SERP2Q8N6R1 65 aa12.93□□□□□ -0.34
ITGB4-201ENST00000200181 C11orf1Q9H5F2 150 aa12.93□□□□□ -0.34
ITGB4-201ENST00000200181 TIMM17BO60830 172 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 C1orf195Q5TG92 126 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
ITGB4-201ENST00000200181 PLXNA2O75051 1894 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 NOTCH3Q9UM47 2321 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 CCDC179H3BU77 68 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 PRR4Q16378 134 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 FAM222AQ5U5X8 452 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 SERP1Q9Y6X1 66 aa12.92□□□□□ -0.34
ITGB4-201ENST00000200181 PLA2G5P39877 138 aa12.91□□□□□ -0.34
ITGB4-201ENST00000200181 FAM19A3Q7Z5A8 133 aa12.91□□□□□ -0.34
ITGB4-201ENST00000200181 DAZAP2Q15038 168 aaPredicted RBP12.91□□□□□ -0.34
ITGB4-201ENST00000200181 DCANP1Q8TF63 244 aa12.91□□□□□ -0.34
ITGB4-201ENST00000200181 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
ITGB4-201ENST00000200181 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
ITGB4-201ENST00000200181 TSC2P49815 1807 aa12.9□□□□□ -0.34
ITGB4-201ENST00000200181 C6orf99Q4VX62 202 aa12.9□□□□□ -0.34
ITGB4-201ENST00000200181 XAGE1AQ9HD64 81 aa12.9□□□□□ -0.34
ITGB4-201ENST00000200181 RLFQ13129 1914 aa12.9□□□□□ -0.34
ITGB4-201ENST00000200181 ACACAQ13085 2346 aa12.9□□□□□ -0.34
ITGB4-201ENST00000200181 WFDC13Q8IUB5 93 aa12.89□□□□□ -0.35
ITGB4-201ENST00000200181 DNAJC9-AS1A6NH13 148 aa12.89□□□□□ -0.35
ITGB4-201ENST00000200181 SPTAN1Q13813 2472 aaKnown RBP12.89□□□□□ -0.35
ITGB4-201ENST00000200181 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
ITGB4-201ENST00000200181 SMIM9A6NGZ8 99 aa12.88□□□□□ -0.35
ITGB4-201ENST00000200181 Q8N9L7 120 aa12.88□□□□□ -0.35
ITGB4-201ENST00000200181 MALRD1Q5VYJ5 2156 aa12.87□□□□□ -0.35
ITGB4-201ENST00000200181 RBX1P62877 108 aa12.87□□□□□ -0.35
ITGB4-201ENST00000200181 TRBV27A0A0K0K1C4 114 aa12.87□□□□□ -0.35
ITGB4-201ENST00000200181 CACNA1GO43497 2377 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 IMUPQ9GZP8 106 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 C9orf85Q96MD7 179 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 DEFB131BA0A096LNP1 70 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 NLRC5Q86WI3 1866 aa12.86□□□□□ -0.35
ITGB4-201ENST00000200181 TRBV6-8A0A0A6YYG3 113 aa12.85□□□□□ -0.35
ITGB4-201ENST00000200181 SPINK6Q6UWN8 80 aa12.85□□□□□ -0.35
ITGB4-201ENST00000200181 CFAP126Q5VTH2 177 aa12.85□□□□□ -0.35
ITGB4-201ENST00000200181 P0C879 139 aa12.84□□□□□ -0.35
ITGB4-201ENST00000200181 SYCNQ0VAF6 134 aa12.84□□□□□ -0.35
ITGB4-201ENST00000200181 K7EQG2 157 aa12.84□□□□□ -0.35
ITGB4-201ENST00000200181 HILS1P60008 231 aa12.84□□□□□ -0.35
ITGB4-201ENST00000200181 TRBV6-5A0A0K0K1A5 114 aa12.84□□□□□ -0.35
ITGB4-201ENST00000200181 IGF2-ASQ6U949 168 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 LINC01548A6NM66 108 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 M0QY20 66 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 TNFRSF13BO14836 293 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-201ENST00000200181 COX7CP15954 63 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-201ENST00000200181 IGKV2-28A0A075B6P5 120 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 ODF3BA8MYP8 253 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 IGKV2D-28P01615 120 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 IGF1P05019 195 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-201ENST00000200181 PPDPFQ9H3Y8 114 aa12.83□□□□□ -0.36
ITGB4-201ENST00000200181 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
ITGB4-201ENST00000200181 DHRS4-AS1Q9P1J3 65 aa12.82□□□□□ -0.36
ITGB4-201ENST00000200181 HRCT1Q6UXD1 115 aa12.82□□□□□ -0.36
ITGB4-201ENST00000200181 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
ITGB4-201ENST00000200181 Q6ZQY7 126 aa12.81□□□□□ -0.36
ITGB4-201ENST00000200181 U3KQK5 164 aa12.81□□□□□ -0.36
ITGB4-201ENST00000200181 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
ITGB4-201ENST00000200181 FAM30AQ9NZY2 134 aa12.81□□□□□ -0.36
ITGB4-201ENST00000200181 ZNF706Q9Y5V0 76 aaPredicted RBP12.81□□□□□ -0.36
ITGB4-201ENST00000200181 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 MBD6Q96DN6 1003 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 RNF185Q96GF1 192 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 GTF3C1Q12789 2109 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 TRBV6-4A0A1B0GX49 114 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 LY6LH3BQJ8 138 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
ITGB4-201ENST00000200181 M0R378 163 aa12.79□□□□□ -0.36
ITGB4-201ENST00000200181 LRRC75A-AS1Q8N1F1 130 aa12.79□□□□□ -0.36
ITGB4-201ENST00000200181 A8MZ25 164 aa12.79□□□□□ -0.36
ITGB4-201ENST00000200181 M0QXV9 152 aa12.79□□□□□ -0.36
ITGB4-201ENST00000200181 UBE2D1P51668 147 aa12.79□□□□□ -0.36
ITGB4-201ENST00000200181 LST1O00453 97 aa12.78□□□□□ -0.36
ITGB4-201ENST00000200181 PROK1P58294 105 aa12.78□□□□□ -0.36
ITGB4-201ENST00000200181 MED13Q9UHV7 2174 aa12.78□□□□□ -0.36
ITGB4-201ENST00000200181 Q8N976 141 aa12.78□□□□□ -0.36
ITGB4-201ENST00000200181 XGP55808 180 aa12.78□□□□□ -0.36
ITGB4-201ENST00000200181 PYGO1Q9Y3Y4 419 aa12.78□□□□□ -0.36
ITGB4-201ENST00000200181 CRIP1P50238 77 aa12.76□□□□□ -0.37
ITGB4-201ENST00000200181 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
ITGB4-201ENST00000200181 MIFP14174 115 aa12.75□□□□□ -0.37
ITGB4-201ENST00000200181 Q6YL49 198 aa12.75□□□□□ -0.37
ITGB4-201ENST00000200181 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
ITGB4-201ENST00000200181 UBE2D4Q9Y2X8 147 aa12.75□□□□□ -0.37
ITGB4-201ENST00000200181 CD164L2Q6UWJ8 174 aa12.75□□□□□ -0.37
ITGB4-201ENST00000200181 LINC00574Q9H8X3 128 aa12.74□□□□□ -0.37
ITGB4-201ENST00000200181 OBSL1O75147 1896 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms