RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 UBE2D2P62837 147 aa12.57□□□□□ -0.4
CLDN11-201ENST00000064724 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
CLDN11-201ENST00000064724 CFC1P0CG37 223 aa12.57□□□□□ -0.4
CLDN11-201ENST00000064724 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
CLDN11-201ENST00000064724 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
CLDN11-201ENST00000064724 APOMO95445 188 aa12.56□□□□□ -0.4
CLDN11-201ENST00000064724 FHL3Q13643 280 aa12.56□□□□□ -0.4
CLDN11-201ENST00000064724 RS1O15537 224 aa12.56□□□□□ -0.4
CLDN11-201ENST00000064724 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
CLDN11-201ENST00000064724 SPANXA1Q9NS26 97 aa12.56□□□□□ -0.4
CLDN11-201ENST00000064724 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
CLDN11-201ENST00000064724 HIST2H2BDQ6DRA6 164 aa12.54□□□□□ -0.4
CLDN11-201ENST00000064724 UBE2D4Q9Y2X8 147 aa12.54□□□□□ -0.4
CLDN11-201ENST00000064724 ETDBQ3ZM63 59 aa12.54□□□□□ -0.4
CLDN11-201ENST00000064724 CEMP1Q6PRD7 247 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-201ENST00000064724 C10orf126Q8N4M7 172 aa12.54□□□□□ -0.4
CLDN11-201ENST00000064724 MYO9AB2RTY4 2548 aa12.54□□□□□ -0.4
CLDN11-201ENST00000064724 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
CLDN11-201ENST00000064724 IGHV3-30-3P0DP02 117 aa12.53□□□□□ -0.4
CLDN11-201ENST00000064724 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
CLDN11-201ENST00000064724 SH2D6Q7Z4S9 175 aa12.53□□□□□ -0.4
CLDN11-201ENST00000064724 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
CLDN11-201ENST00000064724 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.4
CLDN11-201ENST00000064724 TINCRA0A1B0GVN0 87 aa12.52□□□□□ -0.4
CLDN11-201ENST00000064724 XCL2Q9UBD3 114 aa12.52□□□□□ -0.4
CLDN11-201ENST00000064724 PRO1854Q9UHT4 67 aa12.52□□□□□ -0.4
CLDN11-201ENST00000064724 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.41
CLDN11-201ENST00000064724 AZU1P20160 251 aa12.52□□□□□ -0.41
CLDN11-201ENST00000064724 COTL1Q14019 142 aa12.52□□□□□ -0.41
CLDN11-201ENST00000064724 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.41
CLDN11-201ENST00000064724 TIMM21Q9BVV7 248 aa12.52□□□□□ -0.41
CLDN11-201ENST00000064724 TMEM238C9JI98 176 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 J3QR89 54 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 CCL24O00175 119 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 STHQ8IWL8 128 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 MTURNQ8N3F0 131 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 IL17DQ8TAD2 202 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 APCP25054 2843 aa12.51□□□□□ -0.41
CLDN11-201ENST00000064724 A0A0J9YXY3 114 aa12.5□□□□□ -0.41
CLDN11-201ENST00000064724 A4D1N5 150 aa12.5□□□□□ -0.41
CLDN11-201ENST00000064724 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
CLDN11-201ENST00000064724 IGHV1-58A0A0C4DH39 117 aa12.5□□□□□ -0.41
CLDN11-201ENST00000064724 TRBV20-1A0A075B6N2 111 aa12.49□□□□□ -0.41
CLDN11-201ENST00000064724 PSMB2P49721 201 aa12.49□□□□□ -0.41
CLDN11-201ENST00000064724 SMCPP49901 116 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-201ENST00000064724 ZNF469Q96JG9 3925 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-201ENST00000064724 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-201ENST00000064724 A0A0B4J2C4 111 aa12.49□□□□□ -0.41
CLDN11-201ENST00000064724 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-201ENST00000064724 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
CLDN11-201ENST00000064724 SFTA2Q6UW10 78 aa12.49□□□□□ -0.41
CLDN11-201ENST00000064724 MUSTN1Q8IVN3 82 aa12.49□□□□□ -0.41
CLDN11-201ENST00000064724 EIF4EBP3O60516 100 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-201ENST00000064724 TMEM263Q8WUH6 116 aaKnown RBP12.48□□□□□ -0.41
CLDN11-201ENST00000064724 LITAFQ99732 161 aa12.48□□□□□ -0.41
CLDN11-201ENST00000064724 TRAV8-3A0A0A6YYJ7 113 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 VSIG2Q96IQ7 327 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 IGHV3-38A0A0C4DH36 116 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 Q6ZUT4 128 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 C11orf44Q8N8P7 122 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
CLDN11-201ENST00000064724 AKAP9Q99996 3911 aa12.46□□□□□ -0.41
CLDN11-201ENST00000064724 TCL1BO95988 128 aa12.46□□□□□ -0.41
CLDN11-201ENST00000064724 IGHV3-33P01772 117 aa12.46□□□□□ -0.41
CLDN11-201ENST00000064724 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-201ENST00000064724 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-201ENST00000064724 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
CLDN11-201ENST00000064724 ITPR3Q14573 2671 aa12.45□□□□□ -0.42
CLDN11-201ENST00000064724 TLN2Q9Y4G6 2542 aa12.45□□□□□ -0.42
CLDN11-201ENST00000064724 TIRAPP58753 221 aa12.45□□□□□ -0.42
CLDN11-201ENST00000064724 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
CLDN11-201ENST00000064724 TSSC4Q9Y5U2 329 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-201ENST00000064724 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
CLDN11-201ENST00000064724 IGLV5-45A0A087WSX0 123 aa12.44□□□□□ -0.42
CLDN11-201ENST00000064724 TRGV1A0A0A0MS02 117 aa12.44□□□□□ -0.42
CLDN11-201ENST00000064724 ADARB2-AS1A8MUL3 147 aa12.44□□□□□ -0.42
CLDN11-201ENST00000064724 SBSPONQ8IVN8 264 aa12.44□□□□□ -0.42
CLDN11-201ENST00000064724 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 KRTAP1-1Q07627 177 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 SPANXDQ9BXN6 97 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 C16orf95Q9H693 158 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 SPANXCQ9NY87 97 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 GAGE12HA6NDE8 117 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 INSL3P51460 131 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 CMC4P56277 68 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-201ENST00000064724 SPATA25Q9BR10 227 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 GEMIN7Q9H840 131 aaKnown RBP12.43□□□□□ -0.42
CLDN11-201ENST00000064724 ERG28Q9UKR5 140 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
CLDN11-201ENST00000064724 FOXI1Q12951 378 aa12.42□□□□□ -0.42
CLDN11-201ENST00000064724 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
CLDN11-201ENST00000064724 LINC01006Q8NI28 216 aa12.42□□□□□ -0.42
CLDN11-201ENST00000064724 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
CLDN11-201ENST00000064724 SCGB1C2P0DMR2 95 aa12.42□□□□□ -0.42
CLDN11-201ENST00000064724 SONP18583 2426 aaKnown RBP12.41□□□□□ -0.42
CLDN11-201ENST00000064724 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
CLDN11-201ENST00000064724 RNASE1P07998 156 aaKnown RBP12.41□□□□□ -0.42
CLDN11-201ENST00000064724 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms