RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Zfp493E9Q1L8 384 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Klf12O35738 402 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Znrd1Q791N7 123 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr491Q8VG06 310 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Hyls1Q9CXX0 307 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 DnlzQ9D113 177 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Dazap2Q9DCP9 168 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm21913J3KML9 361 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm21776J3QPJ5 361 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr149Q60888 311 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Psg17Q62056 475 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Wdr82Q8BFQ4 313 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr954Q9EQB6 314 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 EsdQ9R0P3 282 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ccl8Q9Z121 97 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Col12a1Q60847 3120 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ighv5-9A0A075B5Q2 117 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ighv1-36A0A0A6YXT2 117 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm10203F6QJ09 66 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Cd33Q63994 403 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Cdkn2aQ64364 169 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gpr132Q9Z282 382 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 CenpfE9Q3P4 2997 aaKnown RBP10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ms4a12A0A087WSB9 263 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr143P34985 313 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm16686Q3UMN9 131 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1382Q7TQT3 311 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1178Q7TR20 323 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Leprotl1Q9CQ74 131 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gtsf1Q9DAN6 167 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Fhl3Q9R059 289 aa10.57□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1179A2AUS6 307 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tbr1Q64336 681 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Rnd1Q8BLR7 232 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ammecr1lQ8JZZ6 310 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tctex1d1Q9D5I4 173 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Crim1Q9JLL0 1037 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Klk4Q9Z0M1 255 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ncoa6Q9JL19 2067 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Col4a4Q9QZR9 1682 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Foxi3E0CZH3 425 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Slc25a17O70579 307 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Emp2O88662 172 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tpsb2P21845 276 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Efna2P52801 209 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Col9a1Q05722 921 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm11232Q5SPI8 295 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 H2-M10.4Q85ZW8 331 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr484Q8VFD3 321 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tmem160Q9D938 188 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Jbts17Q8CE72 3214 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Igkv13-85A0A075B666 115 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm45753A0A1C7CYU8 86 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Plcxd2B2RXA1 340 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Smim13E9Q942 88 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Pilrb2Q2YFS1 225 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Zfp455Q7M6X9 461 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Elovl5Q8BHI7 299 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 AgrnA2ASQ1 1950 aa10.56□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm37388A0A0A6YY46 143 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Cd209gD3Z5D4 194 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Zfp976E9Q981 636 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Bcl6bO88282 474 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm10384Q3UQ87 92 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Q497N7 227 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ifi27Q8C6G0 260 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ube2tQ9CQ37 204 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Adamts17E9Q4D1 1122 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm6970F7DCP6 221 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Spint5J3KMK8 105 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ca11O70354 328 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 P01789 122 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Bsph1Q3UW26 133 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Fbxl7Q5BJ29 491 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1243Q8VGM7 305 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Plpp2Q9DAX2 276 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Chd7A2AJK6 2986 aaKnown RBP10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1024A2ASU7 327 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Defa-rs12P50716 91 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr16Q62007 309 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tm4sf20Q9CQY8 226 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ube2cQ9D1C1 179 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 GgctQ9D7X8 188 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ighv1-34A0A075B5V2 117 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm21900J3QP38 180 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 GchfrP99025 84 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Rtl4Q3URY0 304 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Trdv4Q5R1A3 115 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Q8C708 225 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tmem189Q99LQ7 271 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 ManfQ9CXI5 179 aaKnown RBP10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Zdhhc16Q9ESG8 361 aa10.55□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1192-ps1A0A1L1SRD7 309 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 P01660 111 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Rpl27aP14115 148 aaKnown RBP10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Id3P41133 119 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Cd96Q3U0X8 602 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Znf260Q62513 407 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Morn2Q6UL01 79 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Znf787Q8BIF9 381 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms