RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 EGR2P11161 476 aaPredicted RBP4.35□□□□□ -1.71
SCARB2-218ENST00000639715 NDPQ00604 133 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 LINC00336Q6ZUF6 198 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 RHPN1-AS1Q9BWJ2 59 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 IGHV1-69DA0A0B4J2H0 117 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 ADARB2-AS1A8MUL3 147 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 IGHV1-69P01742 117 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 IGHG2P01859 326 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 CTSGP08311 255 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
SCARB2-218ENST00000639715 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 C11orf68Q9H3H3 251 aaKnown RBP4.34□□□□□ -1.71
SCARB2-218ENST00000639715 G3V318 75 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 H3BUA1 57 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 U3KQK5 164 aa4.34□□□□□ -1.71
SCARB2-218ENST00000639715 MUC6Q6W4X9 2439 aa4.34□□□□□ -1.72
SCARB2-218ENST00000639715 IGHV7-81A0A0B4J1V7 117 aa4.34□□□□□ -1.72
SCARB2-218ENST00000639715 TRIAP1O43715 76 aa4.34□□□□□ -1.72
SCARB2-218ENST00000639715 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.72
SCARB2-218ENST00000639715 C14orf178Q8N769 122 aaPredicted RBP4.34□□□□□ -1.72
SCARB2-218ENST00000639715 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.72
SCARB2-218ENST00000639715 H7C423 109 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 GHRHP01286 108 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 RNASE1P07998 156 aaKnown RBP4.33□□□□□ -1.72
SCARB2-218ENST00000639715 HOXB4P17483 251 aaPredicted RBP4.33□□□□□ -1.72
SCARB2-218ENST00000639715 ADAMTS20P59510 1910 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 TRAV12-2A0A075B6T6 113 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 C11orf86A6NJI1 115 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 BRD3OSQ6XYD6 125 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 C22orf34Q6ZV56 151 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 Q8NA96 180 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 LY6G5BQ8NDX9 201 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 PRORYQ9H606 182 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 TP53TG1Q9Y2A0 90 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 USP17L23D6RBM5 183 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 FAM19A4Q96LR4 140 aa4.33□□□□□ -1.72
SCARB2-218ENST00000639715 BUB3O43684 328 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 Q6ZS46 218 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 FANCD2OSQ96PS1 177 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 TNRC6BQ9UPQ9 1833 aaKnown RBP4.32□□□□□ -1.72
SCARB2-218ENST00000639715 CXCL5P42830 114 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 TRBV30A0A0K0K1B3 111 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 GRNP28799 593 aaKnown RBP4.32□□□□□ -1.72
SCARB2-218ENST00000639715 Q8N9W7 124 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 PCNTO95613 3336 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 OVOL3O00110 214 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 MSMBP08118 114 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 GNLYP22749 145 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 TMEM141Q96I45 108 aa4.32□□□□□ -1.72
SCARB2-218ENST00000639715 ZNF462Q96JM2 2506 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 C19orf54Q5BKX5 351 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 TRAV23DV6A0A075B6W5 121 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 LY6LH3BQJ8 138 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 SOCS3O14543 225 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 TIMM17BO60830 172 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 C9orf85Q96MD7 179 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 NOTCH3Q9UM47 2321 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 ODF3BA8MYP8 253 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 CRIP1P50238 77 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 DAZ2Q13117 558 aaKnown RBP4.31□□□□□ -1.72
SCARB2-218ENST00000639715 DAZ4Q86SG3 579 aaKnown RBP4.31□□□□□ -1.72
SCARB2-218ENST00000639715 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 DAZ3Q9NR90 486 aaKnown RBP4.31□□□□□ -1.72
SCARB2-218ENST00000639715 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
SCARB2-218ENST00000639715 UBE2L6O14933 153 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 RUSC1-AS1Q66K80 236 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 DSCAMO60469 2012 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 IGHV7-4-1A0A0J9YVY3 117 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 NEXN-AS1Q8NBZ9 246 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 IGKV3D-20A0A0C4DH25 116 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 EBI3Q14213 229 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 LINC01356Q8N9X3 169 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
SCARB2-218ENST00000639715 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 A0A087WVE0 104 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 CRYGDP07320 174 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 ZNF876PQ49A33 203 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 TMEM86BQ8N661 226 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
SCARB2-218ENST00000639715 IGHV3OR16-12A0A075B7B8 117 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 CD28P10747 220 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
SCARB2-218ENST00000639715 ITLN2Q8WWU7 325 aaPredicted RBP4.29□□□□□ -1.72
SCARB2-218ENST00000639715 TLN1Q9Y490 2541 aaKnown RBP4.29□□□□□ -1.72
SCARB2-218ENST00000639715 PTPN13Q12923 2485 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 I3L3M4 83 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 LEPROTO15243 131 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms