RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SYS1-DBNDD2H3BUS1 97 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 PRB4P10163 310 aaPredicted RBP4.16□□□□□ -1.74
CHD2-227ENST00000637572 CFHR3Q02985 330 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 KIR2DL5AQ8N109 375 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 KIR2DL5BQ8NHK3 375 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 HINT1P49773 126 aaPredicted RBP4.15□□□□□ -1.74
CHD2-227ENST00000637572 LGALS9BQ3B8N2 356 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.15□□□□□ -1.74
CHD2-227ENST00000637572 MRPL16Q9NX20 251 aaKnown RBP4.15□□□□□ -1.74
CHD2-227ENST00000637572 TACC2O95359 2948 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 LYRM9A8MSI8 78 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 SMKR1H3BMG3 65 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 SPRY2O43597 315 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 PMVKQ15126 192 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 FAM110AQ9BQ89 295 aa4.15□□□□□ -1.74
CHD2-227ENST00000637572 ASPMQ8IZT6 3477 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 TMEM238C9JI98 176 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 TIRAPP58753 221 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 COA6Q5JTJ3 125 aaKnown RBP4.15□□□□□ -1.75
CHD2-227ENST00000637572 SPANXA1Q9NS26 97 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 TOMM7Q9P0U1 55 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 TP53TG1Q9Y2A0 90 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 COL27A1Q8IZC6 1860 aaPredicted RBP4.15□□□□□ -1.75
CHD2-227ENST00000637572 SPEGQ15772 3267 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 K7EQD1 137 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 VPREB1P12018 145 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 ICOSQ9Y6W8 199 aa4.15□□□□□ -1.75
CHD2-227ENST00000637572 CKS1BP61024 79 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 PIK3CD-AS1Q5SR53 167 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 SFTA2Q6UW10 78 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 PHLDA1Q8WV24 401 aaPredicted RBP4.14□□□□□ -1.75
CHD2-227ENST00000637572 PKIGQ9Y2B9 76 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 RAI1Q7Z5J4 1906 aaPredicted RBP4.14□□□□□ -1.75
CHD2-227ENST00000637572 TRAV4A0A0B4J268 109 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 FSHBP01225 129 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 NPYP01303 97 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 C3orf79P0CE67 100 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 MIFP14174 115 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 FHL3Q13643 280 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 LGALS9CQ6DKI2 356 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 ATOH7Q8N100 152 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 PRB2P02812 416 aaPredicted RBP4.14□□□□□ -1.75
CHD2-227ENST00000637572 ADAMTSL5Q6ZMM2 481 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 ZFP2Q6ZN57 461 aa4.14□□□□□ -1.75
CHD2-227ENST00000637572 RBMY1BA6NDE4 496 aaKnown RBP4.13□□□□□ -1.75
CHD2-227ENST00000637572 RBMY1EA6NEQ0 496 aaKnown RBP4.13□□□□□ -1.75
CHD2-227ENST00000637572 GAGE10A6NGK3 116 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 RBMY1DP0C7P1 496 aaKnown RBP4.13□□□□□ -1.75
CHD2-227ENST00000637572 RBMY1A1P0DJD3 496 aaKnown RBP4.13□□□□□ -1.75
CHD2-227ENST00000637572 RBMY1CP0DJD4 496 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 FABP2P12104 132 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 RPL24P83731 157 aaKnown RBP4.13□□□□□ -1.75
CHD2-227ENST00000637572 KRTAP21-3Q3LHN1 58 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 C10orf99Q6UWK7 81 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 HCFC1P51610 2035 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 TRAV8-2A0A0B4J237 113 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 IGHV3-16A0A0C4DH30 117 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 IGLV2-8P01709 118 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 HERVK_113P63121 156 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 KLK9Q2XQG4 91 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 PRIMA1Q86XR5 153 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 ZNF815PA8K554 130 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 SNAI2O43623 268 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 IGLC6P0CF74 106 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 SMIM13P0DJ93 91 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 DEFB125Q8N687 156 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 DCANP1Q8TF63 244 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 GTSF1Q8WW33 167 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 PRO0255Q9UI72 69 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 LOC400499M0QZD8 3231 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 TRBV7-3A0A075B6L6 115 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 KRTAP24-1Q3LI83 254 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 SUMO4Q6EEV6 95 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 ATP6V0E2Q8NHE4 81 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 TIMM21Q9BVV7 248 aa4.13□□□□□ -1.75
CHD2-227ENST00000637572 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
CHD2-227ENST00000637572 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.12□□□□□ -1.75
CHD2-227ENST00000637572 LOC105371267A0A1B0GV96 52 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 F8VRH5 84 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 PSCAO43653 123 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 IGLV1-51P01701 117 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 CCL18P55774 89 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 MRGPRG-AS1Q2M3A8 158 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 TDRG1Q3Y452 100 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 C6orf226Q5I0X4 101 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 MRPL52Q86TS9 123 aaKnown RBP4.12□□□□□ -1.75
CHD2-227ENST00000637572 ZFAND2AQ8N6M9 145 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 SORL1Q92673 2214 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 KLLNB2CW77 178 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 NPSP0C0P6 89 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 ZNF25P17030 456 aaPredicted RBP4.12□□□□□ -1.75
CHD2-227ENST00000637572 PROK1P58294 105 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 HSD52Q0P140 79 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 ZC2HC1BQ5TFG8 222 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 BOD1L2Q8IYS8 172 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 TANC2Q9HCD6 1990 aa4.12□□□□□ -1.75
CHD2-227ENST00000637572 TRAV13-1A0A0B4J241 112 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms