RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 WFDC6Q9BQY6 131 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 ATPIF1Q9UII2 106 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 PARP14Q460N5 1801 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 ZMYM4Q5VZL5 1548 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 KIAA0100Q14667 2235 aaKnown RBP-0.81□□□□□ -2.54
SRP54-214ENST00000630962 MYO7BQ6PIF6 2116 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 TMEM238C9JI98 176 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 DPM2O94777 84 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 G0S2P27469 103 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 DCDP81605 110 aaKnown RBP-0.82□□□□□ -2.54
SRP54-214ENST00000630962 KRTAP20-2Q3LI61 65 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 TMEM35BQ8NCS4 154 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 OR9Q1Q8NGQ5 310 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 PCBD2Q9H0N5 130 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 ZNF609O15014 1411 aa-0.82□□□□□ -2.54
SRP54-214ENST00000630962 IBTKQ9P2D0 1353 aaPredicted RBP-0.83□□□□□ -2.54
SRP54-214ENST00000630962 FLGP20930 4061 aaPredicted RBP-0.83□□□□□ -2.54
SRP54-214ENST00000630962 IFT172Q9UG01 1749 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 HLA-DRB4P13762 266 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 S100A3P33764 101 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 SAMD13Q5VXD3 122 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 OR8I2Q8N0Y5 310 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 MNS1Q8NEH6 495 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 TP53AIP1Q9HCN2 124 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 HLA-DRB4X5D2U9 266 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 MXRA5Q9NR99 2828 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 OVOS2A0A0G2JMS6 1433 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 FAT1Q14517 4588 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 ROCK1Q13464 1354 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 SVEP1Q4LDE5 3571 aa-0.83□□□□□ -2.54
SRP54-214ENST00000630962 UHRF1BP1LA0JNW5 1464 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 YPEL1O60688 119 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 RPL7L1Q6DKI1 246 aaKnown RBP-0.84□□□□□ -2.54
SRP54-214ENST00000630962 SPAG11AQ6PDA7 123 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 ATP11AUNQ6ZP68 121 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 C10orf82Q8WW14 230 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 FXYD6Q9H0Q3 95 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 NDUFA12Q9UI09 145 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 SIPA1L3O60292 1781 aaPredicted RBP-0.84□□□□□ -2.54
SRP54-214ENST00000630962 ERCC6L2Q5T890 1561 aa-0.84□□□□□ -2.54
SRP54-214ENST00000630962 PKHD1P08F94 4074 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 PCLOQ9Y6V0 5065 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 J3KT08 172 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 LAMA5O15230 3695 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 LINC01545Q5VT33 79 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 TMEM244Q5VVB8 128 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 BAGE3Q86Y29 109 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 RPRMQ9NS64 109 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 LSM2Q9Y333 95 aaKnown RBP-0.85□□□□□ -2.55
SRP54-214ENST00000630962 WNK3Q9BYP7 1800 aa-0.85□□□□□ -2.55
SRP54-214ENST00000630962 MUC22E2RYF6 1773 aaPredicted RBP-0.85□□□□□ -2.55
SRP54-214ENST00000630962 ERCC6Q03468 1493 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 SETD2Q9BYW2 2564 aaPredicted RBP-0.86□□□□□ -2.55
SRP54-214ENST00000630962 TSC2P49815 1807 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 A6NIN4 97 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 E2F6O75461 281 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 S100GP29377 79 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 GNG10P50151 68 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 UBE2D1P51668 147 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 TMEM128Q5BJH2 165 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 Q5VV11 94 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 LRP6O75581 1613 aa-0.86□□□□□ -2.55
SRP54-214ENST00000630962 PLXNB2O15031 1838 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 PRKDCP78527 4128 aaKnown RBP-0.87□□□□□ -2.55
SRP54-214ENST00000630962 URB1O60287 2271 aaKnown RBP-0.87□□□□□ -2.55
SRP54-214ENST00000630962 KDM3BQ7LBC6 1761 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 TRBV6-1A0A0K0K1D8 114 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 CLPSL1A2RUU4 121 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 E5RI56 91 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 CMPK1P30085 196 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 PIGYQ3MUY2 71 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 SPANXN1Q5VSR9 72 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 TOMM20LQ6UXN7 152 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 CDC26Q8NHZ8 85 aa-0.87□□□□□ -2.55
SRP54-214ENST00000630962 LAMC1P11047 1609 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 A0A1B0GV72 72 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 M0R2T5 61 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 IFNA17P01571 189 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 PIRTP0C851 137 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 SPRR1BP22528 89 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 UBE2G1P62253 170 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 RBM3P98179 157 aaKnown RBP-0.88□□□□□ -2.55
SRP54-214ENST00000630962 C9orf116Q5BN46 136 aaPredicted RBP-0.88□□□□□ -2.55
SRP54-214ENST00000630962 TCTE3Q8IZS6 198 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 SPTSSBQ8NFR3 76 aa-0.88□□□□□ -2.55
SRP54-214ENST00000630962 MAGOHBQ96A72 148 aaKnown RBP-0.88□□□□□ -2.55
SRP54-214ENST00000630962 HERC2O95714 4834 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 I3L2K1 104 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 M0R129 80 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 COX6B1P14854 86 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 MIC13Q5XKP0 118 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 VSTM2AQ8TAG5 236 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 WDR7Q9Y4E6 1490 aa-0.89□□□□□ -2.55
SRP54-214ENST00000630962 XIRP1Q702N8 1843 aaKnown RBP-0.89□□□□□ -2.55
SRP54-214ENST00000630962 USH2AO75445 5202 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 TRAV36DV7A0A075B6V5 113 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 TNFSF15O95150 251 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 PPP1R2P3Q6NXS1 205 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 CTAGE3PQ8IX95 158 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 AGPAT4-IT1Q9H0P7 198 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms