RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CHTF8P0CG12 524 aa12.74□□□□□ -0.37
TARDBP-228ENST00000629725 ODF1Q14990 250 aa12.74□□□□□ -0.37
TARDBP-228ENST00000629725 ZNF56Q15929 161 aa12.74□□□□□ -0.37
TARDBP-228ENST00000629725 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
TARDBP-228ENST00000629725 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
TARDBP-228ENST00000629725 HIST1H2BAQ96A08 127 aa12.74□□□□□ -0.37
TARDBP-228ENST00000629725 NKX6-2Q9C056 277 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-228ENST00000629725 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-228ENST00000629725 RBX1P62877 108 aa12.73□□□□□ -0.37
TARDBP-228ENST00000629725 MAP1LC3B2A6NCE7 125 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 LINC01559Q495D7 138 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 TMEM97Q5BJF2 176 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 COX8CQ7Z4L0 72 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 MAP1LC3BQ9GZQ8 125 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 ZFP30Q9Y2G7 519 aa12.72□□□□□ -0.37
TARDBP-228ENST00000629725 IGLV10-54A0A075B6I4 117 aa12.71□□□□□ -0.37
TARDBP-228ENST00000629725 GAGE6Q13070 117 aa12.71□□□□□ -0.37
TARDBP-228ENST00000629725 PLAC8Q9NZF1 115 aa12.71□□□□□ -0.37
TARDBP-228ENST00000629725 G3V3Q6 166 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 UBE2G1P62253 170 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 REG3AQ06141 175 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 FMC1Q96HJ9 113 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 DERL1Q9BUN8 251 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 KIF25-AS1Q9Y6Z4 181 aa12.7□□□□□ -0.38
TARDBP-228ENST00000629725 TRBV25-1A0A075B6N4 114 aa12.69□□□□□ -0.38
TARDBP-228ENST00000629725 ARPC5O15511 151 aa12.69□□□□□ -0.38
TARDBP-228ENST00000629725 SLPIP03973 132 aa12.69□□□□□ -0.38
TARDBP-228ENST00000629725 VAX2Q9UIW0 290 aa12.69□□□□□ -0.38
TARDBP-228ENST00000629725 CST9LP1Q5W188 147 aa12.68□□□□□ -0.38
TARDBP-228ENST00000629725 CYTL1Q9NRR1 136 aa12.68□□□□□ -0.38
TARDBP-228ENST00000629725 A0A0J9YXV3 536 aa12.67□□□□□ -0.38
TARDBP-228ENST00000629725 TRBV6-1A0A0K0K1D8 114 aa12.67□□□□□ -0.38
TARDBP-228ENST00000629725 GAS8-AS1O95177 125 aa12.67□□□□□ -0.38
TARDBP-228ENST00000629725 WDR73Q6P4I2 378 aa12.67□□□□□ -0.38
TARDBP-228ENST00000629725 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
TARDBP-228ENST00000629725 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
TARDBP-228ENST00000629725 F5H697 171 aa12.66□□□□□ -0.38
TARDBP-228ENST00000629725 LTAP01374 205 aa12.66□□□□□ -0.38
TARDBP-228ENST00000629725 P01737 135 aa12.66□□□□□ -0.38
TARDBP-228ENST00000629725 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
TARDBP-228ENST00000629725 AKR1C3P42330 323 aa12.65□□□□□ -0.38
TARDBP-228ENST00000629725 FHITP49789 147 aa12.65□□□□□ -0.38
TARDBP-228ENST00000629725 PRR3P79522 188 aaKnown RBP12.65□□□□□ -0.38
TARDBP-228ENST00000629725 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
TARDBP-228ENST00000629725 TCEAL7Q9BRU2 100 aa12.65□□□□□ -0.38
TARDBP-228ENST00000629725 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
TARDBP-228ENST00000629725 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
TARDBP-228ENST00000629725 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
TARDBP-228ENST00000629725 LPAP08519 4548 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 PAGE4O60829 102 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 GZMBP10144 247 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 RAB5CP51148 216 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 COX6A2Q02221 97 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 C20orf203Q8NBC4 194 aa12.63□□□□□ -0.39
TARDBP-228ENST00000629725 SMLR1H3BR10 107 aa12.62□□□□□ -0.39
TARDBP-228ENST00000629725 RGS21Q2M5E4 152 aa12.61□□□□□ -0.39
TARDBP-228ENST00000629725 MAJINQ3KP22 176 aa12.61□□□□□ -0.39
TARDBP-228ENST00000629725 SPANXN1Q5VSR9 72 aa12.61□□□□□ -0.39
TARDBP-228ENST00000629725 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
TARDBP-228ENST00000629725 MUC21A0A0G2JKD1 596 aa12.6□□□□□ -0.39
TARDBP-228ENST00000629725 MUC21A0A140T8X8 626 aa12.6□□□□□ -0.39
TARDBP-228ENST00000629725 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
TARDBP-228ENST00000629725 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
TARDBP-228ENST00000629725 IGLV4-60A0A075B6I1 120 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 IGKV2-24A0A0C4DH68 120 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 A0A1B0GUV1 79 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 A0A1B0GV50 99 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 SSTP61278 116 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 STPG4Q8N801 248 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 FAM213BQ8TBF2 198 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 SFT2D1Q8WV19 159 aa12.59□□□□□ -0.39
TARDBP-228ENST00000629725 SCO2A0A1W2PP80 73 aa12.58□□□□□ -0.4
TARDBP-228ENST00000629725 SNAI2O43623 268 aa12.58□□□□□ -0.4
TARDBP-228ENST00000629725 CXCL1P09341 107 aa12.58□□□□□ -0.4
TARDBP-228ENST00000629725 RPS10P46783 165 aaKnown RBP12.58□□□□□ -0.4
TARDBP-228ENST00000629725 ZNF345Q14585 488 aa12.58□□□□□ -0.4
TARDBP-228ENST00000629725 KCNRGQ8N5I3 272 aa12.58□□□□□ -0.4
TARDBP-228ENST00000629725 SSBP4Q9BWG4 385 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-228ENST00000629725 GFRA4Q9GZZ7 299 aa12.58□□□□□ -0.4
TARDBP-228ENST00000629725 S100A9P06702 114 aaKnown RBP12.57□□□□□ -0.4
TARDBP-228ENST00000629725 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
TARDBP-228ENST00000629725 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
TARDBP-228ENST00000629725 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
TARDBP-228ENST00000629725 MBD3L1Q8WWY6 194 aa12.57□□□□□ -0.4
TARDBP-228ENST00000629725 UMAD1C9J7I0 102 aa12.56□□□□□ -0.4
TARDBP-228ENST00000629725 PFDN1O60925 122 aa12.56□□□□□ -0.4
TARDBP-228ENST00000629725 CFAP161Q6P656 301 aa12.56□□□□□ -0.4
TARDBP-228ENST00000629725 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
TARDBP-228ENST00000629725 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
TARDBP-228ENST00000629725 TMEM243Q9BU79 118 aa12.55□□□□□ -0.4
TARDBP-228ENST00000629725 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
TARDBP-228ENST00000629725 M0QY20 66 aa12.53□□□□□ -0.4
TARDBP-228ENST00000629725 SULT1A2P50226 295 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms