RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 SKA2Q8WVK7 121 aaPredicted RBP-0.54□□□□□ -2.5
SCARNA4-201ENST00000629045 TGP01266 2768 aa-0.54□□□□□ -2.5
SCARNA4-201ENST00000629045 SPTBN2O15020 2390 aa-0.54□□□□□ -2.5
SCARNA4-201ENST00000629045 PI4KAP42356 2102 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 LAMA2P24043 3122 aaKnown RBP-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 HECTD1Q9ULT8 2610 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 BSNQ9UPA5 3926 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 SPINK8P0C7L1 97 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 SPRR2EP22531 72 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 MAGOHBQ96A72 148 aaKnown RBP-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 CNFNQ9BYD5 112 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 PIEZO2Q9H5I5 2752 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 CHD6Q8TD26 2715 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 DOCK11Q5JSL3 2073 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 PTPRMP28827 1452 aa-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 TEP1Q99973 2627 aaKnown RBP-0.55□□□□□ -2.5
SCARNA4-201ENST00000629045 MAP1AP78559 2803 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 PKD1L1Q8TDX9 2849 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 TRAV36DV7A0A075B6V5 113 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 K7EQZ3 153 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 M0R2P5 195 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 CMPK1P30085 196 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 TCTE3Q8IZS6 198 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 FER1L6Q2WGJ9 1857 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 PCNX1Q96RV3 2341 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 BIRC6Q9NR09 4857 aa-0.56□□□□□ -2.5
SCARNA4-201ENST00000629045 VWFP04275 2813 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 USP9XQ93008 2570 aaPredicted RBP-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 PKHD1P08F94 4074 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 TRBV10-3A0A0K0K1G6 114 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 G3V318 75 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 TNFSF15O95150 251 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 SCTP09683 121 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 EDDM3BP56851 147 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 DEFA5Q01523 94 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 SPAG11AQ6PDA7 123 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 DDA1Q9BW61 102 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 HIGD1AQ9Y241 93 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 LSM2Q9Y333 95 aaKnown RBP-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 SVEP1Q4LDE5 3571 aa-0.57□□□□□ -2.5
SCARNA4-201ENST00000629045 CSPG4Q6UVK1 2322 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 A0A1B0GX51 115 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 TSTD3H0UI37 97 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 KRTAP6-2Q3LI66 62 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 Q5VSD8 79 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 WFDC6Q9BQY6 131 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 NDUFA12Q9UI09 145 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 GINS2Q9Y248 185 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 HSPB11Q9Y547 144 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 NHSL1Q5SYE7 1610 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 LAMB1P07942 1786 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 MYO18BQ8IUG5 2567 aa-0.58□□□□□ -2.5
SCARNA4-201ENST00000629045 ATRQ13535 2644 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 TRAV1-2A0A0B4J238 106 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 M0R2T5 61 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 PIN1P1O15428 100 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 SPRR1AP35321 89 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 LINC01545Q5VT33 79 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 SMIM15Q7Z3B0 74 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 KDM5CP41229 1560 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 SPTBN4Q9H254 2564 aa-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 DSPP15924 2871 aaKnown RBP-0.59□□□□□ -2.5
SCARNA4-201ENST00000629045 CASZ1Q86V15 1759 aa-0.6□□□□□ -2.5
SCARNA4-201ENST00000629045 GOLGA3Q08378 1498 aa-0.6□□□□□ -2.5
SCARNA4-201ENST00000629045 TRAV22A0A0B4J277 110 aa-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 FXYD6Q9H0Q3 95 aa-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 SPANXCQ9NY87 97 aa-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 HELZP42694 1942 aaKnown RBP-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 IBTKQ9P2D0 1353 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 BIVM-ERCC5R4GMW8 1640 aa-0.6□□□□□ -2.51
SCARNA4-201ENST00000629045 DNHD1Q96M86 4753 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 MUC17Q685J3 4493 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 FAT2Q9NYQ8 4349 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 TNRC18O15417 2968 aaPredicted RBP-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 MYH1P12882 1939 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 TRBV20-1A0A075B6N2 111 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 NCS1P62166 190 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 C9orf116Q5BN46 136 aaPredicted RBP-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 RPRMQ9NS64 109 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 DNAH6Q9C0G6 4158 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 ERCC6Q03468 1493 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 IQSEC2Q5JU85 1478 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 ARAP1Q96P48 1450 aa-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 NIPBLQ6KC79 2804 aaeCLIP-0.61□□□□□ -2.51
SCARNA4-201ENST00000629045 ZNF142P52746 1687 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 PKHD1L1Q86WI1 4243 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 ZMYM4Q5VZL5 1548 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 FXYD6-FXYD2A0A087WZ82 144 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 A6NIN4 97 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 APOC4-APOC2K7ER74 178 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 PIRTP0C851 137 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 SMIM6P0DI80 62 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 SPANXN1Q5VSR9 72 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 RPL7L1Q6DKI1 246 aaKnown RBP-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 VSTM2AQ8TAG5 236 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 C10orf82Q8WW14 230 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 SPTA1P02549 2419 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 GVINP1Q7Z2Y8 2422 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 SPTBN1Q01082 2364 aaKnown RBP-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms