RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
TCF4-249ENST00000625716 ZNF56Q15929 161 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 LINC01556Q5JQF7 62 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 UFSP1Q6NVU6 142 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 ALKAL2Q6UX46 152 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
TCF4-249ENST00000625716 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
TCF4-249ENST00000625716 SMIM12Q96EX1 92 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 TPPP3Q9BW30 176 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 URGCP-MRPS24S4R325 110 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 MUC21A0A0G2JKD1 596 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 TRBV10-1A0A0K0K1A3 114 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 MUC21A0A140T8X8 626 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 SNAI2O43623 268 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 OR5AL1P0C617 328 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 RAB4BP61018 213 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 TOR2AQ5JU69 321 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 OR10AG1Q8NH19 301 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 TM2D2Q9BX73 214 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 Q9HAA7 133 aa4.32□□□□□ -1.72
TCF4-249ENST00000625716 TRBV7-3A0A075B6L6 115 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 TRAV8-3A0A0A6YYJ7 113 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 RBFOX3A6NFN3 312 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 IBA57-AS1B1ANH7 110 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 F2Z2F3 143 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 CEBPGP53567 150 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 CACNG7P62955 275 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 Q6ZRN7 208 aaPredicted RBP4.31□□□□□ -1.72
TCF4-249ENST00000625716 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 AP1S3Q96PC3 154 aa4.31□□□□□ -1.72
TCF4-249ENST00000625716 HECTD4Q9Y4D8 3996 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 A0A087WTM6 91 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 A0A087WX48 190 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 H7C1H1 209 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 IGLV2-8P01709 118 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 MGPP08493 103 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 TRGC1P0CF51 173 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 LINC00694P0DN24 101 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 GZMBP10144 247 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 LAGE3Q14657 143 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 ELOBQ15370 118 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 RMI2Q96E14 147 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 EIF5A2Q9GZV4 153 aaKnown RBP4.3□□□□□ -1.72
TCF4-249ENST00000625716 Q9UF83 564 aa4.3□□□□□ -1.72
TCF4-249ENST00000625716 C19orf71A6NCJ1 209 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 TMEM250H0YL14 139 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 CDK2AP2O75956 126 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 IGLC6P0CF74 106 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 NKX2-5P52952 324 aaPredicted RBP4.29□□□□□ -1.72
TCF4-249ENST00000625716 UBE2D3P61077 147 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 PKIAP61925 76 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 UBE2D2P62837 147 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 TWIST1Q15672 202 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 LYZL1Q6UWQ5 148 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 SMIM15Q7Z3B0 74 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 NEXN-AS1Q8NBZ9 246 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 OR10G8Q8NGN5 311 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 OCC1Q8TAD7 63 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 RPP21Q9H633 154 aaKnown RBP4.29□□□□□ -1.72
TCF4-249ENST00000625716 FAM30AQ9NZY2 134 aa4.29□□□□□ -1.72
TCF4-249ENST00000625716 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 TRBV6-8A0A0A6YYG3 113 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 GATCO43716 136 aaKnown RBP4.28□□□□□ -1.72
TCF4-249ENST00000625716 NTF3P20783 257 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 GCSHP23434 173 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 WDR73Q6P4I2 378 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 TEX261Q6UWH6 196 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
TCF4-249ENST00000625716 NIT1Q86X76 327 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 MAPKAPK5-AS1Q8N8E1 139 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 LYPD6BQ8NI32 183 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 BORCS7Q96B45 105 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 DNAJC30Q96LL9 226 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 CHCHD5Q9BSY4 110 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.72
TCF4-249ENST00000625716 DPH3P1Q9H4G8 78 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 DAZ3Q9NR90 486 aaKnown RBP4.28□□□□□ -1.72
TCF4-249ENST00000625716 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
TCF4-249ENST00000625716 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 IGKV2D-24A0A075B6R9 120 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 K7EN84 100 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
TCF4-249ENST00000625716 CRPP02741 224 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 Q0VG73 95 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 FAM210AQ96ND0 272 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 SMIM7Q9BQ49 75 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 KLK12Q9UKR0 248 aa4.27□□□□□ -1.73
TCF4-249ENST00000625716 KIF25-AS1Q9Y6Z4 181 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms