RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 KRTAP10-2P60368 255 aa14.35□□□□□ -0.11
PMPCA-212ENST00000622209 RPL36AP83881 106 aaKnown RBP14.35□□□□□ -0.11
PMPCA-212ENST00000622209 TWIST1Q15672 202 aa14.35□□□□□ -0.11
PMPCA-212ENST00000622209 ADIRFQ15847 76 aa14.35□□□□□ -0.11
PMPCA-212ENST00000622209 TSKUQ8WUA8 353 aa14.35□□□□□ -0.11
PMPCA-212ENST00000622209 RPL36ALQ969Q0 106 aaKnown RBP14.35□□□□□ -0.11
PMPCA-212ENST00000622209 TRBV7-3A0A075B6L6 115 aa14.34□□□□□ -0.11
PMPCA-212ENST00000622209 LELP1Q5T871 98 aa14.34□□□□□ -0.11
PMPCA-212ENST00000622209 OR10G8Q8NGN5 311 aa14.34□□□□□ -0.11
PMPCA-212ENST00000622209 TRAV8-6A0A0B4J262 113 aa14.33□□□□□ -0.12
PMPCA-212ENST00000622209 K7EP13 123 aa14.33□□□□□ -0.12
PMPCA-212ENST00000622209 BTF3P20290 206 aaKnown RBP14.33□□□□□ -0.12
PMPCA-212ENST00000622209 EVI2AP22794 236 aa14.33□□□□□ -0.12
PMPCA-212ENST00000622209 DPH3P1Q9H4G8 78 aa14.33□□□□□ -0.12
PMPCA-212ENST00000622209 V9GYV3 84 aa14.33□□□□□ -0.12
PMPCA-212ENST00000622209 TRAV9-2A0A087WT02 112 aa14.32□□□□□ -0.12
PMPCA-212ENST00000622209 WFDC10BQ8IUB3 73 aa14.32□□□□□ -0.12
PMPCA-212ENST00000622209 PGLYRP4Q96LB8 373 aa14.32□□□□□ -0.12
PMPCA-212ENST00000622209 A0A087WWC5 75 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 MGPP08493 103 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 DNAH10OSP0CZ25 163 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 UBE2D3P61077 147 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 UBE2D2P62837 147 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 OR10J3Q5JRS4 329 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 NEXN-AS1Q8NBZ9 246 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 BORCS7Q96B45 105 aa14.31□□□□□ -0.12
PMPCA-212ENST00000622209 HIGD1CA8MV81 97 aa14.3□□□□□ -0.12
PMPCA-212ENST00000622209 H7C1H1 209 aa14.3□□□□□ -0.12
PMPCA-212ENST00000622209 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
PMPCA-212ENST00000622209 IGHV3-38A0A0C4DH36 116 aa14.29□□□□□ -0.12
PMPCA-212ENST00000622209 M0QY20 66 aa14.29□□□□□ -0.12
PMPCA-212ENST00000622209 Q8N1X5 172 aa14.29□□□□□ -0.12
PMPCA-212ENST00000622209 SUMO4Q6EEV6 95 aa14.28□□□□□ -0.12
PMPCA-212ENST00000622209 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.28□□□□□ -0.12
PMPCA-212ENST00000622209 DNAJC30Q96LL9 226 aa14.28□□□□□ -0.12
PMPCA-212ENST00000622209 A0A1B0GUT8 65 aa14.27□□□□□ -0.13
PMPCA-212ENST00000622209 LINC01556Q5JQF7 62 aa14.27□□□□□ -0.13
PMPCA-212ENST00000622209 UQCC3Q6UW78 93 aa14.27□□□□□ -0.13
PMPCA-212ENST00000622209 Q6ZRN7 208 aaPredicted RBP14.27□□□□□ -0.13
PMPCA-212ENST00000622209 TNFRSF18Q9Y5U5 241 aa14.27□□□□□ -0.13
PMPCA-212ENST00000622209 FUSP35637 526 aaKnown RBP eCLIP14.26□□□□□ -0.13
PMPCA-212ENST00000622209 C10orf126Q8N4M7 172 aa14.26□□□□□ -0.13
PMPCA-212ENST00000622209 NAT8BQ9UHF3 227 aa14.26□□□□□ -0.13
PMPCA-212ENST00000622209 SMIM27A0A1W2PRY6 76 aa14.25□□□□□ -0.13
PMPCA-212ENST00000622209 PNRC1Q12796 327 aaPredicted RBP14.25□□□□□ -0.13
PMPCA-212ENST00000622209 RASL11AQ6T310 242 aa14.25□□□□□ -0.13
PMPCA-212ENST00000622209 NUP35Q8NFH5 326 aa14.25□□□□□ -0.13
PMPCA-212ENST00000622209 RIGQ13278 110 aa14.24□□□□□ -0.13
PMPCA-212ENST00000622209 DAZ4Q86SG3 579 aaKnown RBP14.24□□□□□ -0.13
PMPCA-212ENST00000622209 DAZ3Q9NR90 486 aaKnown RBP14.24□□□□□ -0.13
PMPCA-212ENST00000622209 TMEM97Q5BJF2 176 aa14.23□□□□□ -0.13
PMPCA-212ENST00000622209 FRZBQ92765 325 aa14.23□□□□□ -0.13
PMPCA-212ENST00000622209 NIT2Q9NQR4 276 aa14.23□□□□□ -0.13
PMPCA-212ENST00000622209 PPP1R2P9O14990 202 aa14.22□□□□□ -0.13
PMPCA-212ENST00000622209 TMEM191AQ9H0A3 160 aa14.22□□□□□ -0.13
PMPCA-212ENST00000622209 NFE4Q86UQ8 179 aa14.21□□□□□ -0.13
PMPCA-212ENST00000622209 GATD1Q8NB37 220 aa14.21□□□□□ -0.13
PMPCA-212ENST00000622209 TRBV6-8A0A0A6YYG3 113 aa14.2□□□□□ -0.14
PMPCA-212ENST00000622209 EREGO14944 169 aa14.2□□□□□ -0.14
PMPCA-212ENST00000622209 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
PMPCA-212ENST00000622209 TMEM218A2RU14 115 aa14.19□□□□□ -0.14
PMPCA-212ENST00000622209 IBA57-AS1B1ANH7 110 aa14.19□□□□□ -0.14
PMPCA-212ENST00000622209 IGHV3-30P01768 117 aa14.19□□□□□ -0.14
PMPCA-212ENST00000622209 IGHV3-33P01772 117 aa14.19□□□□□ -0.14
PMPCA-212ENST00000622209 IGHV3-30-3P0DP02 117 aa14.19□□□□□ -0.14
PMPCA-212ENST00000622209 IGHV3-30-5P0DP03 117 aa14.19□□□□□ -0.14
PMPCA-212ENST00000622209 NIT1Q86X76 327 aa14.18□□□□□ -0.14
PMPCA-212ENST00000622209 ANAPC16Q96DE5 110 aa14.18□□□□□ -0.14
PMPCA-212ENST00000622209 TRAV26-2A0A0B4J265 109 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 A0A1B0GW15 77 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 LINC00862A6NCI5 91 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 MT-ND4LP03901 98 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 KCNIP4Q6PIL6 250 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 COMMD7Q86VX2 200 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 CHCHD7Q9BUK0 85 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 URGCP-MRPS24S4R325 110 aa14.17□□□□□ -0.14
PMPCA-212ENST00000622209 NTM-AS1Q6ZSK4 140 aa14.16□□□□□ -0.14
PMPCA-212ENST00000622209 F8W036 122 aa14.15□□□□□ -0.14
PMPCA-212ENST00000622209 RAB4AP20338 218 aa14.15□□□□□ -0.14
PMPCA-212ENST00000622209 LAGE3Q14657 143 aa14.15□□□□□ -0.14
PMPCA-212ENST00000622209 A0A087WTM6 91 aa14.14□□□□□ -0.15
PMPCA-212ENST00000622209 A0A087WX48 190 aa14.14□□□□□ -0.15
PMPCA-212ENST00000622209 PKIAP61925 76 aa14.14□□□□□ -0.15
PMPCA-212ENST00000622209 MRAP2Q96G30 205 aa14.14□□□□□ -0.15
PMPCA-212ENST00000622209 RNF185Q96GF1 192 aa14.14□□□□□ -0.15
PMPCA-212ENST00000622209 SEC11CQ9BY50 192 aa14.14□□□□□ -0.15
PMPCA-212ENST00000622209 TRBV25-1A0A075B6N4 114 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 S100A8P05109 93 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 ADCYAP1P18509 176 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 IQCJQ1A5X6 159 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 AMN1Q8IY45 258 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 Q8N3U1 123 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 CHCHD5Q9BSY4 110 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 FAT1Q14517 4588 aa14.13□□□□□ -0.15
PMPCA-212ENST00000622209 IGHV1-24A0A0C4DH33 117 aa14.12□□□□□ -0.15
PMPCA-212ENST00000622209 EPM2AB3EWF7 344 aa14.12□□□□□ -0.15
PMPCA-212ENST00000622209 TMEM262E9PQX1 116 aa14.12□□□□□ -0.15
PMPCA-212ENST00000622209 ELOBQ15370 118 aa14.12□□□□□ -0.15
PMPCA-212ENST00000622209 CDPF1Q6NVV7 123 aa14.12□□□□□ -0.15
PMPCA-212ENST00000622209 RPL39LQ96EH5 51 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms