RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SS18L2Q9UHA2 77 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 KLLNB2CW77 178 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 SPXQ9BT56 116 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 IGHG2P01859 326 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 C10orf126Q8N4M7 172 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 MYO9AB2RTY4 2548 aa11.72□□□□□ -0.53
NPHP4-211ENST00000622020 IGHV4OR15-8A0A075B7B6 117 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 A0A087WW49 117 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 C9JAW5 83 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 PROK1P58294 105 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 ZNF876PQ49A33 203 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 ANKRD29Q8N6D5 301 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 USMG5Q96IX5 58 aa11.71□□□□□ -0.53
NPHP4-211ENST00000622020 PRSS2P07478 247 aa11.71□□□□□ -0.54
NPHP4-211ENST00000622020 DCANP1Q8TF63 244 aa11.71□□□□□ -0.54
NPHP4-211ENST00000622020 KNCNA6PVL3 124 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 MUSTN1Q8IVN3 82 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 A8MWV9 139 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-211ENST00000622020 AVPP01185 164 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 ELANEP08246 267 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 MED14OSP0DP75 135 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 ID1P41134 155 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 PAPPA-AS1Q5QFB9 102 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 Q9UF83 564 aa11.7□□□□□ -0.54
NPHP4-211ENST00000622020 A8MZ25 164 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 M0QY20 66 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 AMELXQ99217 191 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 IGHV3-16A0A0C4DH30 117 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 TMEM141Q96I45 108 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
NPHP4-211ENST00000622020 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 GNLYP22749 145 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 APRG1Q8IVJ8 170 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 TIMM17AQ99595 171 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 CACNA1AO00555 2505 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 SETD2Q9BYW2 2564 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-211ENST00000622020 TRBV27A0A0K0K1C4 114 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 PPDPFLQ8WWR9 84 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 CFAP46Q8IYW2 2715 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 IGHV4-30-2A0A087WSY4 118 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 NXPH4O95158 308 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
NPHP4-211ENST00000622020 FAM208BQ5VWN6 2430 aa11.67□□□□□ -0.54
NPHP4-211ENST00000622020 Q6ZSV7 163 aa11.67□□□□□ -0.54
NPHP4-211ENST00000622020 NRGNQ92686 78 aa11.67□□□□□ -0.54
NPHP4-211ENST00000622020 VCX2Q9H322 139 aa11.67□□□□□ -0.54
NPHP4-211ENST00000622020 A6NDX4 124 aa11.66□□□□□ -0.54
NPHP4-211ENST00000622020 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
NPHP4-211ENST00000622020 PRRC2AP48634 2157 aaKnown RBP11.66□□□□□ -0.54
NPHP4-211ENST00000622020 SLC25A20O43772 301 aa11.66□□□□□ -0.54
NPHP4-211ENST00000622020 WNK1Q9H4A3 2382 aa11.66□□□□□ -0.54
NPHP4-211ENST00000622020 ACACBO00763 2458 aa11.66□□□□□ -0.54
NPHP4-211ENST00000622020 LGALS9O00182 355 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 ZNF22P17026 224 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-211ENST00000622020 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 POM121L12Q8N7R1 296 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 ERG28Q9UKR5 140 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 IGHV4-59P01825 116 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 ATP5J2P56134 94 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
NPHP4-211ENST00000622020 TMEM223A0PJW6 202 aa11.65□□□□□ -0.55
NPHP4-211ENST00000622020 RHODO00212 210 aa11.65□□□□□ -0.55
NPHP4-211ENST00000622020 ATP6V0E2Q8NHE4 81 aa11.64□□□□□ -0.55
NPHP4-211ENST00000622020 IGHV1OR15-1A0A075B7D0 117 aa11.64□□□□□ -0.55
NPHP4-211ENST00000622020 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
NPHP4-211ENST00000622020 IGHV3-33P01772 117 aa11.64□□□□□ -0.55
NPHP4-211ENST00000622020 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
NPHP4-211ENST00000622020 C20orf203Q8NBC4 194 aa11.64□□□□□ -0.55
NPHP4-211ENST00000622020 CCL19Q99731 98 aa11.64□□□□□ -0.55
NPHP4-211ENST00000622020 TRBV20-1A0A075B6N2 111 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 A0A0J9YX75 114 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 B5MCH6 92 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 PKD1L2Q7Z442 2459 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 CD28P10747 220 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 C9orf85Q96MD7 179 aa11.63□□□□□ -0.55
NPHP4-211ENST00000622020 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
NPHP4-211ENST00000622020 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-211ENST00000622020 PTPN13Q12923 2485 aa11.62□□□□□ -0.55
NPHP4-211ENST00000622020 DAND5Q8N907 189 aa11.62□□□□□ -0.55
NPHP4-211ENST00000622020 I3L3M4 83 aa11.62□□□□□ -0.55
NPHP4-211ENST00000622020 LEPROTO15243 131 aa11.62□□□□□ -0.55
NPHP4-211ENST00000622020 UCNP55089 124 aa11.62□□□□□ -0.55
NPHP4-211ENST00000622020 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
NPHP4-211ENST00000622020 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
NPHP4-211ENST00000622020 FBN2P35556 2912 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 TRBV7-9A0A0J9YWB2 115 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 A0A0J9YXY3 114 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 TEX49A0A1B0GTD5 131 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
NPHP4-211ENST00000622020 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms