RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 UBE2D2P62837 147 aa12.73□□□□□ -0.37
CIRBP-245ENST00000621399 RASL11AQ6T310 242 aa12.73□□□□□ -0.37
CIRBP-245ENST00000621399 TMEM191AQ9H0A3 160 aa12.73□□□□□ -0.37
CIRBP-245ENST00000621399 TNFRSF18Q9Y5U5 241 aa12.73□□□□□ -0.37
CIRBP-245ENST00000621399 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 NBDYA0A0U1RRE5 68 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 SIVA1O15304 175 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 CAMPP49913 170 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 LELP1Q5T871 98 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
CIRBP-245ENST00000621399 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.37
CIRBP-245ENST00000621399 A0A1B0GW15 77 aa12.71□□□□□ -0.37
CIRBP-245ENST00000621399 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.37
CIRBP-245ENST00000621399 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
CIRBP-245ENST00000621399 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
CIRBP-245ENST00000621399 GATD1Q8NB37 220 aa12.71□□□□□ -0.37
CIRBP-245ENST00000621399 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.37
CIRBP-245ENST00000621399 A0A087WWC5 75 aa12.7□□□□□ -0.38
CIRBP-245ENST00000621399 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
CIRBP-245ENST00000621399 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
CIRBP-245ENST00000621399 S100A8P05109 93 aa12.69□□□□□ -0.38
CIRBP-245ENST00000621399 Q6ZR54 194 aa12.69□□□□□ -0.38
CIRBP-245ENST00000621399 AMN1Q8IY45 258 aa12.69□□□□□ -0.38
CIRBP-245ENST00000621399 CTDSP1Q9GZU7 261 aa12.69□□□□□ -0.38
CIRBP-245ENST00000621399 RAB4AP20338 218 aa12.68□□□□□ -0.38
CIRBP-245ENST00000621399 HBBP68871 147 aa12.68□□□□□ -0.38
CIRBP-245ENST00000621399 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
CIRBP-245ENST00000621399 DAZ4Q86SG3 579 aaKnown RBP12.68□□□□□ -0.38
CIRBP-245ENST00000621399 FRZBQ92765 325 aa12.68□□□□□ -0.38
CIRBP-245ENST00000621399 RNF185Q96GF1 192 aa12.68□□□□□ -0.38
CIRBP-245ENST00000621399 DAZ3Q9NR90 486 aaKnown RBP12.68□□□□□ -0.38
CIRBP-245ENST00000621399 A0A1B0GXF2 115 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 DNAH10OSP0CZ25 163 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 NDUFA5Q16718 116 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 ATP5L2Q7Z4Y8 100 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 CLRN3Q8NCR9 226 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
CIRBP-245ENST00000621399 MRAP2Q96G30 205 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 IMMP2LQ96T52 175 aa12.66□□□□□ -0.38
CIRBP-245ENST00000621399 TRAV9-2A0A087WT02 112 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 C7orf77A4D0Y5 90 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 APOC3P02656 99 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 FAM104BQ5XKR9 115 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 KCNIP4Q6PIL6 250 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 DNAH2Q9P225 4427 aa12.65□□□□□ -0.38
CIRBP-245ENST00000621399 TRBV6-8A0A0A6YYG3 113 aa12.64□□□□□ -0.39
CIRBP-245ENST00000621399 RHEBQ15382 184 aa12.64□□□□□ -0.39
CIRBP-245ENST00000621399 TMEM97Q5BJF2 176 aa12.64□□□□□ -0.39
CIRBP-245ENST00000621399 KRTAP1-5Q9BYS1 174 aa12.64□□□□□ -0.39
CIRBP-245ENST00000621399 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
CIRBP-245ENST00000621399 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
CIRBP-245ENST00000621399 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
CIRBP-245ENST00000621399 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
CIRBP-245ENST00000621399 C1orf134Q5TEV5 83 aa12.63□□□□□ -0.39
CIRBP-245ENST00000621399 SLC7A5P1Q8MH63 180 aa12.63□□□□□ -0.39
CIRBP-245ENST00000621399 TMEM242Q9NWH2 141 aa12.63□□□□□ -0.39
CIRBP-245ENST00000621399 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 K7EP13 123 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 IGHV3-30P01768 117 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 IGHV3-33P01772 117 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 IGHV3-30-3P0DP02 117 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 IGHV3-30-5P0DP03 117 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 MRPL51Q4U2R6 128 aaKnown RBP12.62□□□□□ -0.39
CIRBP-245ENST00000621399 SVBPQ8N300 66 aa12.62□□□□□ -0.39
CIRBP-245ENST00000621399 NCR2O95944 276 aa12.61□□□□□ -0.39
CIRBP-245ENST00000621399 S100PP25815 95 aa12.61□□□□□ -0.39
CIRBP-245ENST00000621399 NTM-AS1Q6ZSK4 140 aa12.61□□□□□ -0.39
CIRBP-245ENST00000621399 C6orf223Q8N319 242 aa12.61□□□□□ -0.39
CIRBP-245ENST00000621399 ST20Q9HBF5 79 aa12.61□□□□□ -0.39
CIRBP-245ENST00000621399 TRBV6-5A0A0K0K1A5 114 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 SDHAF1A6NFY7 115 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 SNAPINO95295 136 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 CKS2P33552 79 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 RPS10P46783 165 aaKnown RBP12.6□□□□□ -0.39
CIRBP-245ENST00000621399 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 DEFB104AQ8WTQ1 72 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 CHCHD5Q9BSY4 110 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 URGCP-MRPS24S4R325 110 aa12.6□□□□□ -0.39
CIRBP-245ENST00000621399 TRBV25-1A0A075B6N4 114 aa12.59□□□□□ -0.39
CIRBP-245ENST00000621399 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
CIRBP-245ENST00000621399 TMEM262E9PQX1 116 aa12.59□□□□□ -0.39
CIRBP-245ENST00000621399 PPP1R17O96001 155 aa12.59□□□□□ -0.39
CIRBP-245ENST00000621399 COTL1Q14019 142 aa12.59□□□□□ -0.39
CIRBP-245ENST00000621399 NIT1Q86X76 327 aa12.59□□□□□ -0.39
CIRBP-245ENST00000621399 TRAV9-1A0A075B6T8 112 aa12.58□□□□□ -0.4
CIRBP-245ENST00000621399 A0A087WX48 190 aa12.58□□□□□ -0.4
CIRBP-245ENST00000621399 IQCJQ1A5X6 159 aa12.58□□□□□ -0.4
CIRBP-245ENST00000621399 Q8N3U1 123 aa12.58□□□□□ -0.4
CIRBP-245ENST00000621399 RTL8CO15255 209 aa12.57□□□□□ -0.4
CIRBP-245ENST00000621399 BTF3P20290 206 aaKnown RBP12.57□□□□□ -0.4
CIRBP-245ENST00000621399 PMCHP20382 165 aa12.57□□□□□ -0.4
CIRBP-245ENST00000621399 NRACQ8N912 160 aa12.57□□□□□ -0.4
CIRBP-245ENST00000621399 D6R8Y8 96 aa12.56□□□□□ -0.4
CIRBP-245ENST00000621399 I3L3M4 83 aa12.56□□□□□ -0.4
CIRBP-245ENST00000621399 AMTP48728 403 aa12.56□□□□□ -0.4
CIRBP-245ENST00000621399 TMEM70Q9BUB7 260 aa12.56□□□□□ -0.4
CIRBP-245ENST00000621399 PPBPP02775 128 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms