RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
PCGF3-213ENST00000620529 IGHV3-53P01767 116 aa11.85□□□□□ -0.51
PCGF3-213ENST00000620529 ZNF479Q96JC4 524 aa11.85□□□□□ -0.51
PCGF3-213ENST00000620529 SDHAF1A6NFY7 115 aa11.84□□□□□ -0.51
PCGF3-213ENST00000620529 SMIM6P0DI80 62 aa11.84□□□□□ -0.51
PCGF3-213ENST00000620529 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
PCGF3-213ENST00000620529 LAGE3Q14657 143 aa11.84□□□□□ -0.51
PCGF3-213ENST00000620529 TMEM70Q9BUB7 260 aa11.84□□□□□ -0.51
PCGF3-213ENST00000620529 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 K7EMI3 77 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 TCAPO15273 167 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 HBDP02042 147 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 RIPPLY3P57055 190 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 C12orf57Q99622 126 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 LYRM9A8MSI8 78 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 VCYO14598 125 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 KRTDAPP60985 99 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 HSPB8Q9UJY1 196 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
PCGF3-213ENST00000620529 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
PCGF3-213ENST00000620529 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
PCGF3-213ENST00000620529 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
PCGF3-213ENST00000620529 ORMDL2Q53FV1 153 aa11.82□□□□□ -0.52
PCGF3-213ENST00000620529 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
PCGF3-213ENST00000620529 P0DMU3 169 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 FAM231AP0DMU4 169 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 FAM231CP0DMU5 169 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 FCER1GP30273 86 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 Q6ZSN1 163 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 Q8NAQ8 132 aa11.81□□□□□ -0.52
PCGF3-213ENST00000620529 JOSD1Q15040 202 aaPredicted RBP11.8□□□□□ -0.52
PCGF3-213ENST00000620529 FAM222AQ5U5X8 452 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 DNAJC30Q96LL9 226 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 A0A096LNJ9 63 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 TRGV4A0A0C4DH28 118 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 TRBV27A0A0K0K1C4 114 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 DEFB4AO15263 64 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 NUDT3O95989 172 aa11.8□□□□□ -0.52
PCGF3-213ENST00000620529 BTF3P20290 206 aaKnown RBP11.8□□□□□ -0.52
PCGF3-213ENST00000620529 K7EQD1 137 aa11.79□□□□□ -0.52
PCGF3-213ENST00000620529 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
PCGF3-213ENST00000620529 PRB2P02812 416 aaPredicted RBP11.79□□□□□ -0.52
PCGF3-213ENST00000620529 KPRPQ5T749 579 aaPredicted RBP11.79□□□□□ -0.52
PCGF3-213ENST00000620529 LINC00612Q8N6U2 182 aa11.79□□□□□ -0.52
PCGF3-213ENST00000620529 NEXN-AS1Q8NBZ9 246 aa11.79□□□□□ -0.52
PCGF3-213ENST00000620529 C18orf15Q96N68 181 aa11.79□□□□□ -0.52
PCGF3-213ENST00000620529 C3orf79P0CE67 100 aa11.78□□□□□ -0.52
PCGF3-213ENST00000620529 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
PCGF3-213ENST00000620529 TRBV10-1A0A0K0K1A3 114 aa11.78□□□□□ -0.52
PCGF3-213ENST00000620529 I3L3M4 83 aa11.78□□□□□ -0.52
PCGF3-213ENST00000620529 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
PCGF3-213ENST00000620529 G0S2P27469 103 aa11.77□□□□□ -0.53
PCGF3-213ENST00000620529 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
PCGF3-213ENST00000620529 LINC00469Q8N7U9 141 aa11.77□□□□□ -0.53
PCGF3-213ENST00000620529 RETNQ9HD89 108 aa11.77□□□□□ -0.53
PCGF3-213ENST00000620529 NBEAL2Q6ZNJ1 2754 aa11.77□□□□□ -0.53
PCGF3-213ENST00000620529 SPART-AS1P0CW21 52 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 DAD1P61803 113 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
PCGF3-213ENST00000620529 DEFB121Q5J5C9 76 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
PCGF3-213ENST00000620529 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 TRBV6-4A0A1B0GX49 114 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 K7EIL1 84 aa11.76□□□□□ -0.53
PCGF3-213ENST00000620529 RHOHQ15669 191 aa11.75□□□□□ -0.53
PCGF3-213ENST00000620529 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
PCGF3-213ENST00000620529 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
PCGF3-213ENST00000620529 DNAH3Q8TD57 4116 aa11.75□□□□□ -0.53
PCGF3-213ENST00000620529 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 FHL2Q14192 279 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 PRADC1Q9BSG0 188 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 Q9UF83 564 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 LINC01549A6NIU2 74 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 H0Y8G0 127 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 SYS1-DBNDD2H3BUS1 97 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 C2orf66Q6UXQ4 117 aa11.74□□□□□ -0.53
PCGF3-213ENST00000620529 C20orf202A1L168 122 aa11.73□□□□□ -0.53
PCGF3-213ENST00000620529 ATP5LO75964 103 aa11.73□□□□□ -0.53
PCGF3-213ENST00000620529 TOMM6Q96B49 74 aa11.73□□□□□ -0.53
PCGF3-213ENST00000620529 CELA1Q9UNI1 258 aa11.73□□□□□ -0.53
PCGF3-213ENST00000620529 CYSLTR1Q9Y271 337 aa11.73□□□□□ -0.53
PCGF3-213ENST00000620529 TSHBP01222 138 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
PCGF3-213ENST00000620529 GAGE12JA6NER3 117 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 GAGE1Q13065 139 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 GAGE4Q13068 117 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 GAGE5Q13069 117 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 COTL1Q14019 142 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 GAGE13Q4V321 117 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 PET117Q6UWS5 81 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
PCGF3-213ENST00000620529 SCGB3A1Q96QR1 104 aa11.71□□□□□ -0.53
PCGF3-213ENST00000620529 SPATA25Q9BR10 227 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms