RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 A0A1B0GV72 72 aa12.91□□□□□ -0.34
DDX1-207ENST00000617198 RHODO00212 210 aa12.91□□□□□ -0.34
DDX1-207ENST00000617198 SCGB1C2P0DMR2 95 aa12.91□□□□□ -0.34
DDX1-207ENST00000617198 A4D1N5 150 aa12.9□□□□□ -0.34
DDX1-207ENST00000617198 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.35
DDX1-207ENST00000617198 A8MWV9 139 aa12.9□□□□□ -0.35
DDX1-207ENST00000617198 B4DSR2 109 aa12.9□□□□□ -0.35
DDX1-207ENST00000617198 CARD19Q96LW7 228 aa12.9□□□□□ -0.35
DDX1-207ENST00000617198 VCX2Q9H322 139 aa12.9□□□□□ -0.35
DDX1-207ENST00000617198 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
DDX1-207ENST00000617198 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
DDX1-207ENST00000617198 PRORYQ9H606 182 aa12.89□□□□□ -0.35
DDX1-207ENST00000617198 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 IGHV3-64A0A075B6Q5 118 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 A0A0J9YXV3 536 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 TRAV2A0A0B4J234 112 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 TGFAP01135 160 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 TCTEX1D4Q5JR98 221 aa12.88□□□□□ -0.35
DDX1-207ENST00000617198 FHL3Q13643 280 aa12.87□□□□□ -0.35
DDX1-207ENST00000617198 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
DDX1-207ENST00000617198 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
DDX1-207ENST00000617198 RAX2Q96IS3 184 aa12.87□□□□□ -0.35
DDX1-207ENST00000617198 A0A0B4J2C4 111 aa12.87□□□□□ -0.35
DDX1-207ENST00000617198 EIF4EBP3O60516 100 aaPredicted RBP12.87□□□□□ -0.35
DDX1-207ENST00000617198 IGHV3-33P01772 117 aa12.87□□□□□ -0.35
DDX1-207ENST00000617198 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
DDX1-207ENST00000617198 MUSTN1Q8IVN3 82 aa12.86□□□□□ -0.35
DDX1-207ENST00000617198 GATA3P23771 443 aa12.86□□□□□ -0.35
DDX1-207ENST00000617198 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
DDX1-207ENST00000617198 CRYBA4P53673 196 aa12.85□□□□□ -0.35
DDX1-207ENST00000617198 EDA2RQ9HAV5 297 aa12.85□□□□□ -0.35
DDX1-207ENST00000617198 ANKRD29Q8N6D5 301 aa12.85□□□□□ -0.35
DDX1-207ENST00000617198 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
DDX1-207ENST00000617198 COL12A1Q99715 3063 aa12.84□□□□□ -0.35
DDX1-207ENST00000617198 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
DDX1-207ENST00000617198 M0R2P5 195 aa12.84□□□□□ -0.35
DDX1-207ENST00000617198 SPINK8P0C7L1 97 aa12.84□□□□□ -0.35
DDX1-207ENST00000617198 CKS1BP61024 79 aa12.84□□□□□ -0.35
DDX1-207ENST00000617198 A0A0J9YXY3 114 aa12.83□□□□□ -0.35
DDX1-207ENST00000617198 Q6ZUT4 128 aa12.83□□□□□ -0.35
DDX1-207ENST00000617198 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
DDX1-207ENST00000617198 CD28P10747 220 aa12.83□□□□□ -0.36
DDX1-207ENST00000617198 DUX5Q96PT3 197 aa12.83□□□□□ -0.36
DDX1-207ENST00000617198 H7C2G1 150 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 SLC25A20O43772 301 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 MT-ATP8P03928 68 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
DDX1-207ENST00000617198 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 XGP55808 180 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
DDX1-207ENST00000617198 SPXQ9BT56 116 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 M0QXV9 152 aa12.82□□□□□ -0.36
DDX1-207ENST00000617198 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
DDX1-207ENST00000617198 MRPS36P82909 103 aaKnown RBP12.82□□□□□ -0.36
DDX1-207ENST00000617198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.82□□□□□ -0.365e-8■■■■■ 47.2
DDX1-207ENST00000617198 IGHV3-73A0A0B4J1V6 119 aa12.81□□□□□ -0.36
DDX1-207ENST00000617198 C9JAW5 83 aa12.81□□□□□ -0.36
DDX1-207ENST00000617198 HTN1P15515 57 aa12.81□□□□□ -0.36
DDX1-207ENST00000617198 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
DDX1-207ENST00000617198 PROK1P58294 105 aa12.8□□□□□ -0.36
DDX1-207ENST00000617198 DOPEY2Q9Y3R5 2298 aa12.8□□□□□ -0.36
DDX1-207ENST00000617198 ELANEP08246 267 aa12.79□□□□□ -0.36
DDX1-207ENST00000617198 TNFRSF18Q9Y5U5 241 aa12.79□□□□□ -0.36
DDX1-207ENST00000617198 NCOR2Q9Y618 2525 aa12.79□□□□□ -0.36
DDX1-207ENST00000617198 KNCNA6PVL3 124 aa12.79□□□□□ -0.36
DDX1-207ENST00000617198 Q1RN00 199 aa12.79□□□□□ -0.36
DDX1-207ENST00000617198 ITPR1Q14643 2758 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 DSCR9P59020 149 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 CEMP1Q6PRD7 247 aaPredicted RBP12.78□□□□□ -0.36
DDX1-207ENST00000617198 UBE2E2Q96LR5 201 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 LITAFQ99732 161 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 IGHV1-58A0A0C4DH39 117 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 TMEM262E9PQX1 116 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 LINC01356Q8N9X3 169 aa12.78□□□□□ -0.36
DDX1-207ENST00000617198 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.36
DDX1-207ENST00000617198 ATXN8Q156A1 80 aa12.77□□□□□ -0.36
DDX1-207ENST00000617198 SPTBN4Q9H254 2564 aa12.77□□□□□ -0.37
DDX1-207ENST00000617198 DEFB131AP59861 70 aa12.77□□□□□ -0.37
DDX1-207ENST00000617198 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.37
DDX1-207ENST00000617198 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.37
DDX1-207ENST00000617198 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
DDX1-207ENST00000617198 SORL1Q92673 2214 aa12.76□□□□□ -0.37
DDX1-207ENST00000617198 TRBV30A0A0K0K1B3 111 aa12.76□□□□□ -0.37
DDX1-207ENST00000617198 A8MTW9 85 aa12.76□□□□□ -0.37
DDX1-207ENST00000617198 Q5PR19 223 aa12.76□□□□□ -0.37
DDX1-207ENST00000617198 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
DDX1-207ENST00000617198 GEMIN7Q9H840 131 aaKnown RBP12.76□□□□□ -0.37
DDX1-207ENST00000617198 VPREB3Q9UKI3 123 aa12.76□□□□□ -0.37
DDX1-207ENST00000617198 CRYBG3Q68DQ2 2970 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 TINCRA0A1B0GVN0 87 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 PRSS2P07478 247 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 PIK3CD-AS1Q5SR53 167 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 SPANXDQ9BXN6 97 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
DDX1-207ENST00000617198 H3BMM0 161 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms