RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 WT1P19544 449 aaPredicted RBP8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 ETDCA0A1B0GVM5 59 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 PDE6GP18545 87 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 WFDC9Q8NEX5 89 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 Q9HAA7 133 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 GYPEP15421 78 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 DEFB1P60022 68 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 C14orf132Q9NPU4 83 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 CAMK2N2Q96S95 79 aa8.14□□□□□ -1.11
CLTCL1-209ENST00000617103 SP5Q6BEB4 398 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 LINC00574Q9H8X3 128 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 KIAA1671Q9BY89 1806 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 IGHV4-28A0A0C4DH34 117 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 SLURP1P55000 103 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 GPHB5Q86YW7 130 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 C2CD3Q4AC94 2353 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 ACACBO00763 2458 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 GRNP28799 593 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 CXCL5P42830 114 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 EIF4EBP1Q13541 118 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 FRMPD3Q5JV73 1810 aa8.13□□□□□ -1.11
CLTCL1-209ENST00000617103 IGKV2D-24A0A075B6R9 120 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 CCL24O00175 119 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 MSMPQ1L6U9 139 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 C2orf91Q6ZV80 131 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 Q8N7P7 452 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 UBE2BP63146 152 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 Q96MF0 132 aa8.12□□□□□ -1.11
CLTCL1-209ENST00000617103 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 A0A0J9YX75 114 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 NDUFS5O43920 106 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 P0DMU3 169 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 U3KQK5 164 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 IGHV4-38-2P0DP08 117 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 HIGD2BQ4VC39 106 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 CEMP1Q6PRD7 247 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
CLTCL1-209ENST00000617103 BDP1A6H8Y1 2624 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 UNQ9165/PRO28630Q6UXU0 137 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 SPATA25Q9BR10 227 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 IGHV3-33P01772 117 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 DIRC1Q969H9 104 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 PRR14LQ5THK1 2151 aa8.1□□□□□ -1.11
CLTCL1-209ENST00000617103 NCR3O14931 201 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 PRB2P02812 416 aaPredicted RBP8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 MYCNOSP40205 109 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 MED12LQ86YW9 2145 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 ZNF22P17026 224 aaPredicted RBP8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 SEM1Q6ZVN7 128 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 PIP4P1Q86T03 277 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 CRIP1P50238 77 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 SDIM1Q6ZPB5 146 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 IGHV4OR15-8A0A075B7B6 117 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 A0A087WW49 117 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 NDUFA1O15239 70 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 TRIAP1O43715 76 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 UPK3BQ9BT76 320 aa8.09□□□□□ -1.11
CLTCL1-209ENST00000617103 TRBV12-3P01733 135 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 ALPK3Q96L96 1907 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 SORL1Q92673 2214 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 NDUFB1O75438 58 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 ATP5EP2Q5VTU8 51 aa8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 NUP210Q8TEM1 1887 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-209ENST00000617103 CSPG4Q6UVK1 2322 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 RNF185Q96GF1 192 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 TMEM89A2RUT3 159 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 HHLA3Q9XRX5 114 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 TNRC6BQ9UPQ9 1833 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 TTC28Q96AY4 2481 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 RPL18AQ02543 176 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 CDKN2A-AS1Q9UH64 79 aa8.07□□□□□ -1.12
CLTCL1-209ENST00000617103 CACNA1AO00555 2505 aa8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 ZFP36P26651 326 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 IGLV4-3A0A075B6K6 122 aa8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 SPART-AS1P0CW21 52 aa8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 LINC00310P59036 64 aa8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 SIRPDQ9H106 197 aa8.06□□□□□ -1.12
CLTCL1-209ENST00000617103 LINC00308Q8TCZ7 52 aa8.05□□□□□ -1.12
CLTCL1-209ENST00000617103 SPRY4Q9C004 299 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms