RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 LMO4P61968 165 aa13.59□□□□□ -0.23
ATXN2-227ENST00000616825 ARHGAP21Q5T5U3 1957 aa13.59□□□□□ -0.23
ATXN2-227ENST00000616825 RS1O15537 224 aa13.59□□□□□ -0.23
ATXN2-227ENST00000616825 NUPR1O60356 82 aa13.59□□□□□ -0.23
ATXN2-227ENST00000616825 TIRAPP58753 221 aa13.59□□□□□ -0.23
ATXN2-227ENST00000616825 MUSTN1Q8IVN3 82 aa13.59□□□□□ -0.23
ATXN2-227ENST00000616825 TNFRSF13BO14836 293 aaPredicted RBP13.58□□□□□ -0.23
ATXN2-227ENST00000616825 A6NDX4 124 aa13.58□□□□□ -0.24
ATXN2-227ENST00000616825 DSCAMO60469 2012 aa13.58□□□□□ -0.24
ATXN2-227ENST00000616825 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
ATXN2-227ENST00000616825 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.24
ATXN2-227ENST00000616825 LOXL1Q08397 574 aaPredicted RBP13.57□□□□□ -0.24
ATXN2-227ENST00000616825 FRMPD3Q5JV73 1810 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 TRACP01848 142 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 PRO0255Q9UI72 69 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 NDUFS5O43920 106 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 IGLV2-14P01704 120 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 IGLL5B9A064 214 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 C4orf3Q8WVX3 66 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 VSIG2Q96IQ7 327 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 KLK12Q9UKR0 248 aa13.57□□□□□ -0.24
ATXN2-227ENST00000616825 CEP295Q9C0D2 2601 aa13.56□□□□□ -0.24
ATXN2-227ENST00000616825 KMT2EQ8IZD2 1858 aa13.56□□□□□ -0.24
ATXN2-227ENST00000616825 NUP210Q8TEM1 1887 aaPredicted RBP13.56□□□□□ -0.24
ATXN2-227ENST00000616825 DEFB4AO15263 64 aa13.56□□□□□ -0.24
ATXN2-227ENST00000616825 TRBV10-1A0A0K0K1A3 114 aa13.56□□□□□ -0.24
ATXN2-227ENST00000616825 F8W735 103 aaPredicted RBP13.55□□□□□ -0.24
ATXN2-227ENST00000616825 ACYP1P07311 99 aa13.55□□□□□ -0.24
ATXN2-227ENST00000616825 SPAG11BQ08648 103 aa13.55□□□□□ -0.24
ATXN2-227ENST00000616825 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
ATXN2-227ENST00000616825 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
ATXN2-227ENST00000616825 CXCL5P42830 114 aa13.54□□□□□ -0.24
ATXN2-227ENST00000616825 MDFICQ9P1T7 246 aa13.54□□□□□ -0.24
ATXN2-227ENST00000616825 PROP1O75360 226 aa13.54□□□□□ -0.24
ATXN2-227ENST00000616825 TMEM263Q8WUH6 116 aaKnown RBP13.54□□□□□ -0.24
ATXN2-227ENST00000616825 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
ATXN2-227ENST00000616825 C20orf203Q8NBC4 194 aa13.53□□□□□ -0.24
ATXN2-227ENST00000616825 E9PLD3 99 aa13.52□□□□□ -0.24
ATXN2-227ENST00000616825 NDUFB1O75438 58 aa13.52□□□□□ -0.25
ATXN2-227ENST00000616825 BAALCQ8WXS3 180 aa13.52□□□□□ -0.25
ATXN2-227ENST00000616825 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 DAND5Q8N907 189 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 TOMM6Q96B49 74 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 LINC00574Q9H8X3 128 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 HIGD1BQ9P298 99 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 TDRG1Q3Y452 100 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 LINC01620Q4KN68 170 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
ATXN2-227ENST00000616825 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
ATXN2-227ENST00000616825 FXYD2P54710 66 aa13.5□□□□□ -0.25
ATXN2-227ENST00000616825 RBM3P98179 157 aaKnown RBP13.5□□□□□ -0.25
ATXN2-227ENST00000616825 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
ATXN2-227ENST00000616825 KLK5Q9Y337 293 aaPredicted RBP13.5□□□□□ -0.25
ATXN2-227ENST00000616825 WDR87Q6ZQQ6 2873 aa13.5□□□□□ -0.25
ATXN2-227ENST00000616825 P0C879 139 aa13.49□□□□□ -0.25
ATXN2-227ENST00000616825 NREPQ16612 68 aa13.49□□□□□ -0.25
ATXN2-227ENST00000616825 PRRC2AP48634 2157 aaKnown RBP13.49□□□□□ -0.25
ATXN2-227ENST00000616825 IGHV4-28A0A0C4DH34 117 aa13.49□□□□□ -0.25
ATXN2-227ENST00000616825 MAP6D1Q9H9H5 199 aa13.49□□□□□ -0.25
ATXN2-227ENST00000616825 H3BQ85 93 aa13.48□□□□□ -0.25
ATXN2-227ENST00000616825 UBE2AP49459 152 aa13.48□□□□□ -0.25
ATXN2-227ENST00000616825 CCDC140Q96MF4 163 aa13.48□□□□□ -0.25
ATXN2-227ENST00000616825 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 TEN1Q86WV5 123 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 MIR7-3HGQ8N6C7 128 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 LINC01548A6NM66 108 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 ODF1Q14990 250 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 LECT2O14960 151 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 RNASE8Q8TDE3 154 aaKnown RBP13.47□□□□□ -0.25
ATXN2-227ENST00000616825 IGF1P05019 195 aa13.47□□□□□ -0.25
ATXN2-227ENST00000616825 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.25
ATXN2-227ENST00000616825 LRRC75A-AS1Q8N1F1 130 aa13.46□□□□□ -0.25
ATXN2-227ENST00000616825 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.25
ATXN2-227ENST00000616825 JMJD7-PLA2G4BH0Y9G9 81 aa13.46□□□□□ -0.26
ATXN2-227ENST00000616825 FRMD6-AS1P0C7T7 363 aa13.46□□□□□ -0.26
ATXN2-227ENST00000616825 C11orf1Q9H5F2 150 aa13.45□□□□□ -0.26
ATXN2-227ENST00000616825 DIRC1Q969H9 104 aa13.45□□□□□ -0.26
ATXN2-227ENST00000616825 PCDH15Q96QU1 1955 aa13.44□□□□□ -0.26
ATXN2-227ENST00000616825 ANKRD11Q6UB99 2663 aaPredicted RBP13.44□□□□□ -0.26
ATXN2-227ENST00000616825 F8P00451 2351 aa13.44□□□□□ -0.26
ATXN2-227ENST00000616825 C19orf84I3L1E1 186 aa13.44□□□□□ -0.26
ATXN2-227ENST00000616825 TMEM258P61165 79 aa13.44□□□□□ -0.26
ATXN2-227ENST00000616825 K7EQG2 157 aa13.43□□□□□ -0.26
ATXN2-227ENST00000616825 FSTL3O95633 263 aa13.43□□□□□ -0.26
ATXN2-227ENST00000616825 C4orf48Q5BLP8 95 aa13.43□□□□□ -0.26
ATXN2-227ENST00000616825 TNRC6AQ8NDV7 1962 aaKnown RBP13.43□□□□□ -0.26
ATXN2-227ENST00000616825 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
ATXN2-227ENST00000616825 BRWD1-AS2P59051 145 aa13.43□□□□□ -0.26
ATXN2-227ENST00000616825 C22orf34Q6ZV56 151 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 PLXNB3Q9ULL4 1909 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 Q6ZTI0 123 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 A0A0B4J2C4 111 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 A0A1B0GX51 115 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 IL17DQ8TAD2 202 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 PRORYQ9H606 182 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 SPANXCQ9NY87 97 aa13.42□□□□□ -0.26
ATXN2-227ENST00000616825 MP68P56378 58 aa13.41□□□□□ -0.26
ATXN2-227ENST00000616825 WFDC2Q14508 124 aa13.41□□□□□ -0.26
ATXN2-227ENST00000616825 WFDC11Q8NEX6 87 aa13.41□□□□□ -0.26
ATXN2-227ENST00000616825 NCR3O14931 201 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms