RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 PRB1P04280 392 aa10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 PIMREGQ9BSJ6 248 aa10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 LRBAP50851 2863 aa10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 H7C423 109 aa10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 LINC00574Q9H8X3 128 aa10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 RAI1Q7Z5J4 1906 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF11A-205ENST00000616710 VMO1Q7Z5L0 202 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 CCDC168Q8NDH2 2452 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 B9A039 149 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 E7EQL1 145 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 FAM19A5Q7Z5A7 132 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 Q9HAA7 133 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 MSRB2Q9Y3D2 182 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 USP9XQ93008 2570 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGHG4P01861 327 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 ZNF672Q499Z4 452 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
TNFRSF11A-205ENST00000616710 J3KT08 172 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 NXPH4O95158 308 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 LY6G5BQ8NDX9 201 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 C1orf43Q9BWL3 253 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 MBD3L4A6NDZ8 208 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 MBD3L3A6NE82 208 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 MBD3L5A6NJ08 208 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 Q6ZS92 163 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 MBD3L2Q8NHZ7 208 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 CUBNO60494 3623 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 A0A1B0GX51 115 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 NDUFA7O95182 113 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 CSDC2Q9Y534 153 aaKnown RBP10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 JMJD1CQ15652 2540 aa10.6□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 OVOL1O14753 267 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 CRYGBP07316 175 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGHV3-30-3P0DP02 117 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 SVEP1Q4LDE5 3571 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 CRYGDP07320 174 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 BAALC-AS2P0C853 105 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 I3L3M4 83 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGLV4-69A0A075B6H9 119 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 C5orf47Q569G3 176 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 TMEM141Q96I45 108 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 LINC00158P58513 81 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 A0A0G2JNJ9 132 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 Q9UFV3 132 aa10.58□□□□□ -0.72
TNFRSF11A-205ENST00000616710 LEPROTO15243 131 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 COX6B1P14854 86 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 RNF152Q8N8N0 203 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 P0DMU3 169 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
TNFRSF11A-205ENST00000616710 SMIM9A6NGZ8 99 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 C3orf22Q8N5N4 141 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 ZFYVE26Q68DK2 2539 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 UBE2L6O14933 153 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 PAX4O43316 350 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 TSHBP01222 138 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 C20orf173Q96LM9 149 aa10.56□□□□□ -0.72
TNFRSF11A-205ENST00000616710 IGHV7-81A0A0B4J1V7 117 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 CCL21O00585 134 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 RNF5Q99942 180 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 CLPSL1A2RUU4 121 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 CRPP02741 224 aa10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
TNFRSF11A-205ENST00000616710 ABCA2Q9BZC7 2435 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 BRD3OSQ6XYD6 125 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 RELNP78509 3460 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
TNFRSF11A-205ENST00000616710 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 UQCRQO14949 82 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 ADAMTSL4-AS1Q5T5F5 129 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 CENPEQ02224 2701 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 A0A087WVE0 104 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 LINC01619G3V211 115 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 H3BT86 120 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 COL12A1Q99715 3063 aa10.53□□□□□ -0.72
TNFRSF11A-205ENST00000616710 TNFRSF13BO14836 293 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 673 ms