RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CD28P10747 220 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 PMVKQ15126 192 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 FBN2P35556 2912 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGKV2D-26A0A0A0MRZ7 120 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 A6NDX4 124 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 SIVA1O15304 175 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 DEFB136Q30KP8 78 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 FGF6P10767 208 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 GAGE13Q4V321 117 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 A0A096LNJ9 63 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGKV3OR2-268A0A0C4DH90 116 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 RHODO00212 210 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 AVPP01185 164 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 PRB1P04280 392 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
SYNCRIP-204ENST00000616122 A0A0J9YXV3 536 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 K7EMI3 77 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 CIRBPQ14011 172 aaKnown RBP4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRGV1A0A0A0MS02 117 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRAV2A0A0B4J234 112 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGHG4P01861 327 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 LGALS1P09382 135 aaKnown RBP4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 SPXQ9BT56 116 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRAV8-2A0A0B4J237 113 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 A0A0J9YX75 114 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 J3QLI3 93 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 U3KQE9 123 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 K7ERJ3 54 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 C19orf54Q5BKX5 351 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 C10orf99Q6UWK7 81 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 Q6ZS46 218 aa4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRPT1Q86TN4 253 aaKnown RBP4.27□□□□□ -1.73
SYNCRIP-204ENST00000616122 H3BMG7 143 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 Q6ZQT7 251 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 COX8CQ7Z4L0 72 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 Q8N1Y9 231 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 PIFOQ8TCI5 191 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 J3QQQ9 107 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 TOMM7Q9P0U1 55 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 PRO0461Q9UI25 63 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 A0A1W2PPM0 123 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 NUPR2A6NF83 97 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 STHQ8IWL8 128 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 GATD1Q8NB37 220 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 PHLDA1Q8WV24 401 aaPredicted RBP4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 RNF185Q96GF1 192 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 A8MWV9 139 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 K7EQG2 157 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 PRR9Q5T870 116 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 ZFP2Q6ZN57 461 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 PLEKHB2Q96CS7 222 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 MDFICQ9P1T7 246 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 TMEM238C9JI98 176 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 K7EP34 96 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGHV3-53P01767 116 aa4.26□□□□□ -1.73
SYNCRIP-204ENST00000616122 APCP25054 2843 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 KMT2EQ8IZD2 1858 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 CDK2AP2O75956 126 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 TAL2Q16559 108 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 ADAMTS20P59510 1910 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 INSP01308 110 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 C12orf74Q32Q52 190 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGHV4OR15-8A0A075B7B6 117 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 A0A087WW49 117 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 UBE2AP49459 152 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 FOXI2Q6ZQN5 318 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 C20orf203Q8NBC4 194 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 DLX4Q92988 240 aaPredicted RBP4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 TNRC18O15417 2968 aaPredicted RBP4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGHV3-16A0A0C4DH30 117 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 MYMXA0A1B0GTQ4 84 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 C2orf91Q6ZV80 131 aa4.25□□□□□ -1.73
SYNCRIP-204ENST00000616122 SAP30O75446 220 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 MALP21145 153 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 RIPPLY3P57055 190 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 SRSF2Q01130 221 aaKnown RBP4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 ADAMTSL5Q6ZMM2 481 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 RASL10AQ92737 203 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 TIMM21Q9BVV7 248 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 NDUFA12Q9UI09 145 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 U3KQK5 164 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 C20orf173Q96LM9 149 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 Q96MF0 132 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms