RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 DEFB113Q30KQ7 82 aa12.7□□□□□ -0.38
NEK3-206ENST00000611833 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
NEK3-206ENST00000611833 A6NJY4 79 aa12.7□□□□□ -0.38
NEK3-206ENST00000611833 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
NEK3-206ENST00000611833 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
NEK3-206ENST00000611833 ZNRF2Q8NHG8 242 aa12.69□□□□□ -0.38
NEK3-206ENST00000611833 TEX15Q9BXT5 2789 aa12.69□□□□□ -0.38
NEK3-206ENST00000611833 I3L3M4 83 aa12.68□□□□□ -0.38
NEK3-206ENST00000611833 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
NEK3-206ENST00000611833 RBMY1A1P0DJD3 496 aaKnown RBP12.68□□□□□ -0.38
NEK3-206ENST00000611833 RBMY1CP0DJD4 496 aa12.68□□□□□ -0.38
NEK3-206ENST00000611833 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
NEK3-206ENST00000611833 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
NEK3-206ENST00000611833 ABCA12Q86UK0 2595 aa12.67□□□□□ -0.38
NEK3-206ENST00000611833 H3BMG7 143 aa12.67□□□□□ -0.38
NEK3-206ENST00000611833 P0DMU3 169 aa12.67□□□□□ -0.38
NEK3-206ENST00000611833 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
NEK3-206ENST00000611833 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
NEK3-206ENST00000611833 Q96MF0 132 aa12.67□□□□□ -0.38
NEK3-206ENST00000611833 F8W1H4 67 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 KHDC1LQ5JSQ8 128 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 Q8N2B8 174 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 C20orf203Q8NBC4 194 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 NAV2Q8IVL1 2488 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 IGHV3-73A0A0B4J1V6 119 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
NEK3-206ENST00000611833 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 PEMTQ9UBM1 199 aa12.66□□□□□ -0.38
NEK3-206ENST00000611833 A0A0J9YY99 117 aa12.65□□□□□ -0.38
NEK3-206ENST00000611833 H3BMM0 161 aa12.65□□□□□ -0.38
NEK3-206ENST00000611833 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
NEK3-206ENST00000611833 ZNF469Q96JG9 3925 aaPredicted RBP12.65□□□□□ -0.39
NEK3-206ENST00000611833 TSPEAR-AS2P59090 65 aa12.65□□□□□ -0.39
NEK3-206ENST00000611833 LRRC75A-AS1Q8N1F1 130 aa12.65□□□□□ -0.39
NEK3-206ENST00000611833 LGALS3P17931 250 aaKnown RBP12.64□□□□□ -0.39
NEK3-206ENST00000611833 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
NEK3-206ENST00000611833 TEX48A0A1B0GUV7 120 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 J3QQQ9 107 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 WFDC2Q14508 124 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 KRTAP1-3Q8IUG1 177 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 VCX2Q9H322 139 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 CREBBPQ92793 2442 aa12.63□□□□□ -0.39
NEK3-206ENST00000611833 PRM2P04554 102 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 UBE2D1P51668 147 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
NEK3-206ENST00000611833 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
NEK3-206ENST00000611833 APOMO95445 188 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 RBMY1DP0C7P1 496 aaKnown RBP12.62□□□□□ -0.39
NEK3-206ENST00000611833 PROK1P58294 105 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 GAGE13Q4V321 117 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 HIST2H2BDQ6DRA6 164 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
NEK3-206ENST00000611833 COTL1Q14019 142 aa12.61□□□□□ -0.39
NEK3-206ENST00000611833 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
NEK3-206ENST00000611833 M0R2P5 195 aa12.61□□□□□ -0.39
NEK3-206ENST00000611833 SLC25A29Q8N8R3 303 aa12.61□□□□□ -0.39
NEK3-206ENST00000611833 SPANXB1Q9NS25 103 aaPredicted RBP12.61□□□□□ -0.39
NEK3-206ENST00000611833 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
NEK3-206ENST00000611833 IGLV4-3A0A075B6K6 122 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 A8MTW9 85 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 A8MWV9 139 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
NEK3-206ENST00000611833 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 MTURNQ8N3F0 131 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 EDA2RQ9HAV5 297 aa12.6□□□□□ -0.39
NEK3-206ENST00000611833 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 A0A0J9YXV3 536 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 LEPROTO15243 131 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 APCP25054 2843 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 RHODO00212 210 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 TSPAN13O95857 204 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 IGHV3-30P01768 117 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 IGHV3-30-5P0DP03 117 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 ZNF22P17026 224 aaPredicted RBP12.59□□□□□ -0.39
NEK3-206ENST00000611833 SFTA2Q6UW10 78 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 RAX2Q96IS3 184 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 AMELXQ99217 191 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 LINC01587Q99440 93 aa12.59□□□□□ -0.39
NEK3-206ENST00000611833 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
NEK3-206ENST00000611833 CD28P10747 220 aa12.58□□□□□ -0.4
NEK3-206ENST00000611833 NDUFA11Q86Y39 141 aa12.58□□□□□ -0.4
NEK3-206ENST00000611833 ETDBQ3ZM63 59 aa12.57□□□□□ -0.4
NEK3-206ENST00000611833 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
NEK3-206ENST00000611833 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
NEK3-206ENST00000611833 MYO9AB2RTY4 2548 aa12.56□□□□□ -0.4
NEK3-206ENST00000611833 PRO0461Q9UI25 63 aa12.56□□□□□ -0.4
NEK3-206ENST00000611833 PYGO1Q9Y3Y4 419 aa12.56□□□□□ -0.4
NEK3-206ENST00000611833 J3QR89 54 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 PSMB2P49721 201 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 PIK3CD-AS1Q5SR53 167 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 CFAP126Q5VTH2 177 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 CFC1BP0CG36 223 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 CFC1P0CG37 223 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms