RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
NEK3-205ENST00000610828 LINC01587Q99440 93 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 CCL25O15444 150 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 HILS1P60008 231 aa9.97□□□□□ -0.81
NEK3-205ENST00000610828 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
NEK3-205ENST00000610828 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.81
NEK3-205ENST00000610828 IGHV3-73A0A0B4J1V6 119 aa9.96□□□□□ -0.81
NEK3-205ENST00000610828 TAX1BP3O14907 124 aa9.96□□□□□ -0.81
NEK3-205ENST00000610828 SIVA1O15304 175 aa9.96□□□□□ -0.81
NEK3-205ENST00000610828 RPL39P62891 51 aaKnown RBP9.96□□□□□ -0.81
NEK3-205ENST00000610828 STHQ8IWL8 128 aa9.96□□□□□ -0.81
NEK3-205ENST00000610828 HECTD1Q9ULT8 2610 aa9.96□□□□□ -0.81
NEK3-205ENST00000610828 INSP01308 110 aa9.96□□□□□ -0.82
NEK3-205ENST00000610828 ZNF415Q09FC8 603 aa9.96□□□□□ -0.82
NEK3-205ENST00000610828 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
NEK3-205ENST00000610828 OR11H12B2RN74 326 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 M0R2P5 195 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 CIDEAO60543 219 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 SAP30O75446 220 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 UBE2V1Q13404 147 aa9.95□□□□□ -0.82
NEK3-205ENST00000610828 VAMP3Q15836 100 aa9.94□□□□□ -0.82
NEK3-205ENST00000610828 TRAV8-6A0A0B4J262 113 aa9.94□□□□□ -0.82
NEK3-205ENST00000610828 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
NEK3-205ENST00000610828 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
NEK3-205ENST00000610828 TSHBP01222 138 aa9.94□□□□□ -0.82
NEK3-205ENST00000610828 HSD52Q0P140 79 aa9.94□□□□□ -0.82
NEK3-205ENST00000610828 RIPPLY3P57055 190 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 PROK1P58294 105 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 NSUN5P1Q3KNT7 163 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 IGHV3OR16-12A0A075B7B8 117 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 A8MWV9 139 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 SEC11AP67812 179 aa9.93□□□□□ -0.82
NEK3-205ENST00000610828 P0DMU3 169 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 C11orf72Q8NBR9 251 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 CLUHP3Q96NS8 147 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 TRBV25-1A0A075B6N4 114 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 I3L3M4 83 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 LINC00467Q9BRT7 94 aa9.92□□□□□ -0.82
NEK3-205ENST00000610828 NOTCH2Q04721 2471 aa9.91□□□□□ -0.82
NEK3-205ENST00000610828 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
NEK3-205ENST00000610828 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
NEK3-205ENST00000610828 EMP1P54849 157 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 PMVKQ15126 192 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 RHOHQ15669 191 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 MAPKAPK5-AS1Q8N8E1 139 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 CHAC1Q9BUX1 264 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 SETXQ7Z333 2677 aaKnown RBP9.9□□□□□ -0.82
NEK3-205ENST00000610828 A6NDN8 102 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 NDUFA7O95182 113 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 LY6G6DO95868 133 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 AZU1P20160 251 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 UFSP1Q6NVU6 142 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 OR4C5Q8NGB2 326 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 OR11H2Q8NH07 326 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 HIGD1BQ9P298 99 aa9.9□□□□□ -0.82
NEK3-205ENST00000610828 NACAE9PAV3 2078 aa9.9□□□□□ -0.83
NEK3-205ENST00000610828 ADARB2-AS1A8MUL3 147 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 SPXQ9BT56 116 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 EDA2RQ9HAV5 297 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 AMMECR1LQ6DCA0 310 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 TNFRSF18Q9Y5U5 241 aa9.89□□□□□ -0.83
NEK3-205ENST00000610828 IGLV4-69A0A075B6H9 119 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 GCSHP23434 173 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 Q6ZSN1 163 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 PTH2Q96A98 100 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 OTOGQ6ZRI0 2925 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 JMJD1CQ15652 2540 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 IGLV1-51P01701 117 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 OPRPNQ99935 248 aaPredicted RBP9.88□□□□□ -0.83
NEK3-205ENST00000610828 WFDC10AQ9H1F0 79 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 Q9UF83 564 aa9.88□□□□□ -0.83
NEK3-205ENST00000610828 E9PLD3 99 aa9.87□□□□□ -0.83
NEK3-205ENST00000610828 RHODO00212 210 aa9.87□□□□□ -0.83
NEK3-205ENST00000610828 PAPPA-AS1Q5QFB9 102 aa9.87□□□□□ -0.83
NEK3-205ENST00000610828 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
NEK3-205ENST00000610828 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
NEK3-205ENST00000610828 K7EP13 123 aa9.86□□□□□ -0.83
NEK3-205ENST00000610828 CMC4P56277 68 aaPredicted RBP9.86□□□□□ -0.83
NEK3-205ENST00000610828 NOTCH3Q9UM47 2321 aa9.86□□□□□ -0.83
NEK3-205ENST00000610828 MYMXA0A1B0GTQ4 84 aa9.85□□□□□ -0.83
NEK3-205ENST00000610828 FXYD2P54710 66 aa9.85□□□□□ -0.83
NEK3-205ENST00000610828 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
NEK3-205ENST00000610828 H3BRM9 83 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms