RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 VPREB3Q9UKI3 123 aa7.29□□□□□ -1.24
TPM1-233ENST00000610733 IGHV4-59P01825 116 aa7.29□□□□□ -1.24
TPM1-233ENST00000610733 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
TPM1-233ENST00000610733 LGALS1P09382 135 aaKnown RBP7.28□□□□□ -1.24
TPM1-233ENST00000610733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
TPM1-233ENST00000610733 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
TPM1-233ENST00000610733 A8MZ25 164 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 LY6LH3BQJ8 138 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 SUMO4Q6EEV6 95 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 RASL10AQ92737 203 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 USP24Q9UPU5 2620 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 MUC4Q99102 2169 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 J3QQQ9 107 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 PPP1R17O96001 155 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 HHLA3Q9XRX5 114 aa7.28□□□□□ -1.24
TPM1-233ENST00000610733 COX6CP09669 75 aa7.27□□□□□ -1.24
TPM1-233ENST00000610733 PMVKQ15126 192 aa7.27□□□□□ -1.24
TPM1-233ENST00000610733 NBEAL2Q6ZNJ1 2754 aa7.27□□□□□ -1.24
TPM1-233ENST00000610733 IGHV1-69DA0A0B4J2H0 117 aa7.27□□□□□ -1.25
TPM1-233ENST00000610733 MRPS12O15235 138 aaKnown RBP7.27□□□□□ -1.25
TPM1-233ENST00000610733 IGHV1-69P01742 117 aa7.27□□□□□ -1.25
TPM1-233ENST00000610733 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
TPM1-233ENST00000610733 C19orf84I3L1E1 186 aa7.27□□□□□ -1.25
TPM1-233ENST00000610733 OR13C6PQ8NH95 151 aa7.27□□□□□ -1.25
TPM1-233ENST00000610733 PROK1P58294 105 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 APRG1Q8IVJ8 170 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 C5orf56Q8N8D9 126 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 ZFAND3Q9H8U3 227 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 SPANXB1Q9NS25 103 aaPredicted RBP7.26□□□□□ -1.25
TPM1-233ENST00000610733 IGHV4-30-2A0A087WSY4 118 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 IGHG4P01861 327 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 HECTD1Q9ULT8 2610 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 UTP20O75691 2785 aaKnown RBP7.26□□□□□ -1.25
TPM1-233ENST00000610733 OOSP1A8MZH6 123 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 TNFRSF13BO14836 293 aaPredicted RBP7.26□□□□□ -1.25
TPM1-233ENST00000610733 Q8N1Y9 231 aa7.26□□□□□ -1.25
TPM1-233ENST00000610733 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 TIMM21Q9BVV7 248 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 CSDC2Q9Y534 153 aaKnown RBP7.25□□□□□ -1.25
TPM1-233ENST00000610733 MT-ATP8P03928 68 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 TMEM126AQ9H061 195 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 ZNF580Q9UK33 172 aa7.25□□□□□ -1.25
TPM1-233ENST00000610733 IGHV7-4-1A0A0J9YVY3 117 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 RNF223E7ERA6 249 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 GAGE2BQ13066 116 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 GAGE2EQ4V326 116 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 NRACQ8N912 160 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 GAGE2DQ9UEU5 116 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 SLC25A20O43772 301 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 UCNP55089 124 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 MUSTN1Q8IVN3 82 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 PPDPFQ9H3Y8 114 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 CLPSL1A2RUU4 121 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 M0R2P5 195 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 LY6G5BQ8NDX9 201 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
TPM1-233ENST00000610733 ODF3BA8MYP8 253 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 C19orf54Q5BKX5 351 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 SMIM9A6NGZ8 99 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 TMEM262E9PQX1 116 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 WIPF1O43516 503 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 Q6ZUT4 128 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 F8P00451 2351 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 CFAP46Q8IYW2 2715 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 TCL1BO95988 128 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 DEFB112Q30KQ8 113 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 ANKRD29Q8N6D5 301 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 ZFAND2AQ8N6M9 145 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 U3KQK5 164 aa7.23□□□□□ -1.25
TPM1-233ENST00000610733 FAM223BA6NKX1 122 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 NDUFA4O00483 81 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 UBE2L6O14933 153 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 PRB1P04280 392 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 RPL35AP18077 110 aaKnown RBP7.22□□□□□ -1.25
TPM1-233ENST00000610733 Q6ZSV7 163 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 FAM223AQ8IWN6 122 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
TPM1-233ENST00000610733 E9PLD3 99 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 SLURP1P55000 103 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 LMO4P61968 165 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 NDUFA12Q9UI09 145 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 MSMBP08118 114 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 FOXI1Q12951 378 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 C9orf47Q6ZRZ4 202 aa7.22□□□□□ -1.25
TPM1-233ENST00000610733 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.25
TPM1-233ENST00000610733 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.25
TPM1-233ENST00000610733 TOMM6Q96B49 74 aa7.21□□□□□ -1.26
TPM1-233ENST00000610733 IFITM1P13164 125 aa7.21□□□□□ -1.26
TPM1-233ENST00000610733 CIRBPQ14011 172 aaKnown RBP7.21□□□□□ -1.26
TPM1-233ENST00000610733 ZNRF2Q8NHG8 242 aa7.21□□□□□ -1.26
TPM1-233ENST00000610733 FLNAP21333 2647 aaKnown RBP7.21□□□□□ -1.26
TPM1-233ENST00000610733 NF1P21359 2839 aa7.21□□□□□ -1.26
TPM1-233ENST00000610733 A0A096LPF7 62 aa7.2□□□□□ -1.26
TPM1-233ENST00000610733 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms