RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 ZMAT4Q9H898 229 aa12.35□□□□□ -0.43
DDX49-213ENST00000602113 NUPR1O60356 82 aa12.34□□□□□ -0.43
DDX49-213ENST00000602113 SERF1AO75920 110 aa12.34□□□□□ -0.43
DDX49-213ENST00000602113 S100A6P06703 90 aa12.34□□□□□ -0.43
DDX49-213ENST00000602113 C12orf74Q32Q52 190 aa12.34□□□□□ -0.43
DDX49-213ENST00000602113 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
DDX49-213ENST00000602113 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 H7C1H1 209 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 PPP1R17O96001 155 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 HOXA5P20719 270 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 IFI27P40305 119 aaPredicted RBP12.33□□□□□ -0.44
DDX49-213ENST00000602113 SNRPEP62304 92 aaKnown RBP12.33□□□□□ -0.44
DDX49-213ENST00000602113 NIT1Q86X76 327 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
DDX49-213ENST00000602113 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
DDX49-213ENST00000602113 C5orf52A6NGY3 159 aa12.32□□□□□ -0.44
DDX49-213ENST00000602113 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
DDX49-213ENST00000602113 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
DDX49-213ENST00000602113 ST20Q9HBF5 79 aa12.32□□□□□ -0.44
DDX49-213ENST00000602113 IGLV2-18A0A075B6J9 118 aa12.31□□□□□ -0.44
DDX49-213ENST00000602113 K7EQD1 137 aa12.31□□□□□ -0.44
DDX49-213ENST00000602113 NEXN-AS1Q8NBZ9 246 aa12.31□□□□□ -0.44
DDX49-213ENST00000602113 PRSS3P2Q8NHM4 247 aa12.31□□□□□ -0.44
DDX49-213ENST00000602113 TRBV6-4A0A1B0GX49 114 aa12.3□□□□□ -0.44
DDX49-213ENST00000602113 ATP5G1P05496 136 aa12.3□□□□□ -0.44
DDX49-213ENST00000602113 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
DDX49-213ENST00000602113 RNASEKQ6P5S7 137 aaKnown RBP12.3□□□□□ -0.44
DDX49-213ENST00000602113 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
DDX49-213ENST00000602113 SMIM2Q9BVW6 85 aa12.3□□□□□ -0.44
DDX49-213ENST00000602113 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
DDX49-213ENST00000602113 LINC00614P0C842 121 aa12.29□□□□□ -0.44
DDX49-213ENST00000602113 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
DDX49-213ENST00000602113 Q8N8P6 123 aa12.29□□□□□ -0.44
DDX49-213ENST00000602113 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
DDX49-213ENST00000602113 PRKDCP78527 4128 aaKnown RBP12.29□□□□□ -0.44
DDX49-213ENST00000602113 LOC100131303A0A0U1RQF7 123 aa12.29□□□□□ -0.44
DDX49-213ENST00000602113 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
DDX49-213ENST00000602113 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
DDX49-213ENST00000602113 TRBV10-1A0A0K0K1A3 114 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 ESDP10768 282 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 PMCHP20382 165 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 NANOS2P60321 138 aaKnown RBP12.28□□□□□ -0.44
DDX49-213ENST00000602113 PDZD11Q5EBL8 140 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 FA2HQ7L5A8 372 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 HIST3H2BBQ8N257 126 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 C11orf45Q8TAV5 145 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
DDX49-213ENST00000602113 LINC01546A6NGU7 62 aa12.27□□□□□ -0.45
DDX49-213ENST00000602113 HTN3P15516 51 aa12.27□□□□□ -0.45
DDX49-213ENST00000602113 CRYBA4P53673 196 aa12.27□□□□□ -0.45
DDX49-213ENST00000602113 Q6ZTC4 211 aa12.27□□□□□ -0.45
DDX49-213ENST00000602113 CHCHD1Q96BP2 118 aaKnown RBP12.27□□□□□ -0.45
DDX49-213ENST00000602113 COL7A1Q02388 2944 aa12.27□□□□□ -0.45
DDX49-213ENST00000602113 TRBV27A0A0K0K1C4 114 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 F5H768 121 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 RHOHQ15669 191 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 ZNRF2Q8NHG8 242 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 IFITM10A6NMD0 228 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 VCYO14598 125 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 TCAPO15273 167 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
DDX49-213ENST00000602113 GAGE1Q13065 139 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 GAGE4Q13068 117 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 GAGE5Q13069 117 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 AP5S1Q9NUS5 200 aa12.26□□□□□ -0.45
DDX49-213ENST00000602113 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
DDX49-213ENST00000602113 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
DDX49-213ENST00000602113 FAM19A2Q8N3H0 131 aa12.25□□□□□ -0.45
DDX49-213ENST00000602113 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
DDX49-213ENST00000602113 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
DDX49-213ENST00000602113 HSBP1O75506 76 aa12.24□□□□□ -0.45
DDX49-213ENST00000602113 RPL36AP83881 106 aaKnown RBP12.24□□□□□ -0.45
DDX49-213ENST00000602113 RPL36ALQ969Q0 106 aaKnown RBP12.24□□□□□ -0.45
DDX49-213ENST00000602113 A0A0J9YY99 117 aa12.23□□□□□ -0.45
DDX49-213ENST00000602113 PAX4O43316 350 aa12.23□□□□□ -0.45
DDX49-213ENST00000602113 UBE2D3P61077 147 aa12.23□□□□□ -0.45
DDX49-213ENST00000602113 UBE2D2P62837 147 aa12.23□□□□□ -0.45
DDX49-213ENST00000602113 TRAV26-1A0A087WT03 109 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 I3L3M4 83 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 TSHBP01222 138 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 LINC00694P0DN24 101 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
DDX49-213ENST00000602113 STAB2Q8WWQ8 2551 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 A0A096LNJ9 63 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 GYPEP15421 78 aa12.22□□□□□ -0.45
DDX49-213ENST00000602113 LAGE3Q14657 143 aa12.21□□□□□ -0.45
DDX49-213ENST00000602113 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
DDX49-213ENST00000602113 HIST1H2BLQ99880 126 aa12.21□□□□□ -0.45
DDX49-213ENST00000602113 AMTP48728 403 aa12.2□□□□□ -0.46
DDX49-213ENST00000602113 K7EMI3 77 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1854.7 ms