RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C6orf223Q8N319 242 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 C5orf17Q8NAS9 161 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 HSD17B11Q8NBQ5 300 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 INO80EQ8NBZ0 244 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 Q8TAT8 98 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 CMTM2Q8TAZ6 248 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 PTH2Q96A98 100 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TVP23CQ96ET8 276 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 KCNS1Q96KK3 526 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 NKX6-2Q9C056 277 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TMEM167BQ9NRX6 74 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 MRPS16Q9Y3D3 137 aaKnown RBP2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 DNAH11Q96DT5 4516 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 BORCS7-ASMTA0A0B4J1R7 106 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRAV4A0A0B4J268 109 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 A0A0J9YXY3 114 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 A0A0J9YY99 117 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 CTXND1A0A1B0GTU2 59 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 HMSDA8MTL9 139 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 M0R2P5 195 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 SIVA1O15304 175 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 CXorf1O96002 111 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 ORM1P02763 201 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TCRAP04437 139 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 PFN1P07737 140 aaKnown RBP2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 GCHFRP30047 84 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZNF345Q14585 488 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZNF726P1Q15940 193 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 MRPL23Q16540 153 aaKnown RBP2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TMEM183BQ1AE95 376 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 RGS21Q2M5E4 152 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 LINC01620Q4KN68 170 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 SAPCD1Q5SSQ6 148 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 DNLZQ5SXM8 178 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 RPL7L1Q6DKI1 246 aaKnown RBP2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 GOLT1AQ6ZVE7 132 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 ERASQ7Z444 233 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TMEM183AQ8IXX5 376 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 CYB561D1Q8N8Q1 229 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 Q8N9L7 120 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TMEM75Q8N9X5 138 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 OR2T35Q8NGX2 323 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 FAM104AQ969W3 186 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 HIST1H2BAQ96A08 127 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 HYLS1Q96M11 299 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TCEAL7Q9BRU2 100 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 NDFIP1Q9BT67 221 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 SH3BGRL3Q9H299 93 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 TREM1Q9NP99 234 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 CYTL1Q9NRR1 136 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 EPDR1Q9UM22 224 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 PSG8Q9UQ74 426 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 HHLA3Q9XRX5 114 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 ICOSQ9Y6W8 199 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 ARL2-SNX15V9GYD0 113 aa2.27□□□□□ -2.05
CKS1BP3-201ENST00000600888 FXYD6-FXYD2A0A087WZ82 144 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRGV4A0A0C4DH28 118 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRBV6-1A0A0K0K1D8 114 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRBV6-4A0A1B0GX49 114 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 FABP5P3A8MUU1 101 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 C9JCJ5 164 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 HMGB3O15347 200 aaKnown RBP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 RS1O15537 224 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 GNRH2O43555 120 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 EIF3GO75821 320 aaKnown RBP eCLIP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 TYMSP04818 313 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 SEC11BP0C7V7 166 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZNF80P51504 273 aaPredicted RBP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 GNG5P63218 68 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 FLI1Q01543 452 aaPredicted RBP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 LAGE3Q14657 143 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 SMUG1Q53HV7 270 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 LYPD5Q6UWN5 251 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 Q6ZRN7 208 aaPredicted RBP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 NEGR1Q7Z3B1 354 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 LINC01561Q8N1V8 128 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 KCNRGQ8N5I3 272 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 TMEM101Q96IK0 257 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 DAZ3Q9NR90 486 aaKnown RBP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 MRPL16Q9NX20 251 aaKnown RBP2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZFP30Q9Y2G7 519 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
CKS1BP3-201ENST00000600888 A0A0D9SG52 128 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 A0A1B0GWB2 263 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 XKRY2A2RUG3 117 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 MAP1LC3B2A6NCE7 125 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 A8MWV9 139 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 UMAD1C9J7I0 102 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 F6UZH7 168 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 PEX7O00628 323 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 ARPC5O15511 151 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 GCGP01275 180 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 IGHV3-53P01767 116 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 SFTA3P0C7M3 94 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms