RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 M0R2P5 195 aa9.84□□□□□ -0.83
IRF3-223ENST00000599223 SH2D1AO60880 128 aa9.84□□□□□ -0.83
IRF3-223ENST00000599223 GCSHP23434 173 aa9.84□□□□□ -0.83
IRF3-223ENST00000599223 OR4C5Q8NGB2 326 aa9.84□□□□□ -0.83
IRF3-223ENST00000599223 FRZBQ92765 325 aa9.84□□□□□ -0.83
IRF3-223ENST00000599223 K7EP13 123 aa9.83□□□□□ -0.84
IRF3-223ENST00000599223 GATA1P15976 413 aaPredicted RBP9.83□□□□□ -0.84
IRF3-223ENST00000599223 WDR73Q6P4I2 378 aa9.83□□□□□ -0.84
IRF3-223ENST00000599223 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
IRF3-223ENST00000599223 RASL11AQ6T310 242 aa9.82□□□□□ -0.84
IRF3-223ENST00000599223 ATP5L2Q7Z4Y8 100 aa9.82□□□□□ -0.84
IRF3-223ENST00000599223 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
IRF3-223ENST00000599223 C11orf21Q9P2W6 132 aa9.82□□□□□ -0.84
IRF3-223ENST00000599223 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 TRAV21A0A0B4J279 112 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 MT-ND6P03923 174 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 S100A8P05109 93 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 TIRAPP58753 221 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
IRF3-223ENST00000599223 CRIP1P50238 77 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 ZNF80P51504 273 aaPredicted RBP9.8□□□□□ -0.84
IRF3-223ENST00000599223 RAB4BP61018 213 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 Q8N3U1 123 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 SLC25A29Q8N8R3 303 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 Q9HAA7 133 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
IRF3-223ENST00000599223 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 A0A1B0GW15 77 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 IBA57-AS1B1ANH7 110 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 S100A6P06703 90 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 RIGQ13278 110 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 WFDC2Q14508 124 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 CFAP126Q5VTH2 177 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 Q8N814 137 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 GNB1LQ9BYB4 327 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 FAM30AQ9NZY2 134 aa9.79□□□□□ -0.84
IRF3-223ENST00000599223 IGHV3-73A0A0B4J1V6 119 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 PSCAO43653 123 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 HLA-DQA1P01909 254 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 TRGC2P03986 189 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 MRPL54Q6P161 138 aaKnown RBP9.78□□□□□ -0.84
IRF3-223ENST00000599223 SH2D6Q7Z4S9 175 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 TMEM70Q9BUB7 260 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
IRF3-223ENST00000599223 F2Z2F3 143 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 RS1O15537 224 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
IRF3-223ENST00000599223 HBBP68871 147 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 ZNF876PQ49A33 203 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 Q6ZSN1 163 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 FER1L6-AS1Q8NA97 138 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
IRF3-223ENST00000599223 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
IRF3-223ENST00000599223 GZMBP10144 247 aa9.76□□□□□ -0.85
IRF3-223ENST00000599223 RHOHQ15669 191 aa9.76□□□□□ -0.85
IRF3-223ENST00000599223 OR10J3Q5JRS4 329 aa9.76□□□□□ -0.85
IRF3-223ENST00000599223 GTSF1Q8WW33 167 aa9.76□□□□□ -0.85
IRF3-223ENST00000599223 KCNS1Q96KK3 526 aa9.76□□□□□ -0.85
IRF3-223ENST00000599223 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
IRF3-223ENST00000599223 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
IRF3-223ENST00000599223 S100A4P26447 101 aaKnown RBP9.75□□□□□ -0.85
IRF3-223ENST00000599223 CAMPP49913 170 aa9.75□□□□□ -0.85
IRF3-223ENST00000599223 FABP9Q0Z7S8 132 aa9.75□□□□□ -0.85
IRF3-223ENST00000599223 LELP1Q5T871 98 aa9.75□□□□□ -0.85
IRF3-223ENST00000599223 ZFP82Q8N141 532 aa9.75□□□□□ -0.85
IRF3-223ENST00000599223 MRPL18Q9H0U6 180 aaKnown RBP9.75□□□□□ -0.85
IRF3-223ENST00000599223 TRAV8-6A0A0B4J262 113 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 ASIPP42127 132 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 SMIM15Q7Z3B0 74 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 Q9UF83 564 aa9.74□□□□□ -0.85
IRF3-223ENST00000599223 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
IRF3-223ENST00000599223 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
IRF3-223ENST00000599223 APCSP02743 223 aa9.73□□□□□ -0.85
IRF3-223ENST00000599223 CTRLP40313 264 aa9.73□□□□□ -0.85
IRF3-223ENST00000599223 A0A1B0GXF2 115 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 LECT2O14960 151 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 TRGC1P0CF51 173 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 CACNG7P62955 275 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 LAGE3Q14657 143 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 Q6ZSA8 131 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
IRF3-223ENST00000599223 IGKV3D-20A0A0C4DH25 116 aa9.71□□□□□ -0.86
IRF3-223ENST00000599223 ARMS2P0C7Q2 107 aa9.71□□□□□ -0.86
IRF3-223ENST00000599223 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
IRF3-223ENST00000599223 TWIST1Q15672 202 aa9.71□□□□□ -0.86
IRF3-223ENST00000599223 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.86
IRF3-223ENST00000599223 LRP1Q07954 4544 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms