RNA–Protein interactions for RNA: ENST00000591265.1

ZNF554-204, Transcript of zinc finger protein 554, humanhuman

TSL 5 BASIC

Gene ZNF554, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-204ENST00000591265 FOXA3P55318 350 aaPredicted RBP12.06□□□□□ -0.48
ZNF554-204ENST00000591265 RPL36AP83881 106 aaKnown RBP12.06□□□□□ -0.48
ZNF554-204ENST00000591265 IFITM2Q01629 132 aa12.06□□□□□ -0.48
ZNF554-204ENST00000591265 TSKUQ8WUA8 353 aa12.06□□□□□ -0.48
ZNF554-204ENST00000591265 RPL36ALQ969Q0 106 aaKnown RBP12.06□□□□□ -0.48
ZNF554-204ENST00000591265 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
ZNF554-204ENST00000591265 GAGE12JA6NER3 117 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 F5H697 171 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 K7EP13 123 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 NTF3P20783 257 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 GAGE1Q13065 139 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 GAGE4Q13068 117 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 GAGE5Q13069 117 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 TWIST1Q15672 202 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 GAGE13Q4V321 117 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 Q5VSD8 79 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.05□□□□□ -0.48
ZNF554-204ENST00000591265 GTSF1Q8WW33 167 aa12.05□□□□□ -0.48
ZNF554-204ENST00000591265 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
ZNF554-204ENST00000591265 H7C1H1 209 aa12.04□□□□□ -0.48
ZNF554-204ENST00000591265 UQCC3Q6UW78 93 aa12.04□□□□□ -0.48
ZNF554-204ENST00000591265 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
ZNF554-204ENST00000591265 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
ZNF554-204ENST00000591265 KIF25-AS1Q9Y6Z4 181 aa12.04□□□□□ -0.48
ZNF554-204ENST00000591265 TRBV7-3A0A075B6L6 115 aa12.03□□□□□ -0.48
ZNF554-204ENST00000591265 TRAV9-2A0A087WT02 112 aa12.03□□□□□ -0.48
ZNF554-204ENST00000591265 A0A087WWC5 75 aa12.03□□□□□ -0.48
ZNF554-204ENST00000591265 LELP1Q5T871 98 aa12.03□□□□□ -0.48
ZNF554-204ENST00000591265 MSRB1Q9NZV6 116 aa12.03□□□□□ -0.48
ZNF554-204ENST00000591265 HIGD1CA8MV81 97 aa12.02□□□□□ -0.49
ZNF554-204ENST00000591265 MGPP08493 103 aa12.02□□□□□ -0.49
ZNF554-204ENST00000591265 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.49
ZNF554-204ENST00000591265 PGLYRP4Q96LB8 373 aa12.02□□□□□ -0.49
ZNF554-204ENST00000591265 V9GYV3 84 aa12.02□□□□□ -0.49
ZNF554-204ENST00000591265 A0A087WTM6 91 aa12.01□□□□□ -0.49
ZNF554-204ENST00000591265 EVI2AP22794 236 aa12.01□□□□□ -0.49
ZNF554-204ENST00000591265 OR10J3Q5JRS4 329 aa12.01□□□□□ -0.49
ZNF554-204ENST00000591265 A0A1B0GUT8 65 aa12□□□□□ -0.49
ZNF554-204ENST00000591265 FUSP35637 526 aaKnown RBP eCLIP12□□□□□ -0.49
ZNF554-204ENST00000591265 KRTAP10-1P60331 282 aa12□□□□□ -0.49
ZNF554-204ENST00000591265 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
ZNF554-204ENST00000591265 NAT8BQ9UHF3 227 aa12□□□□□ -0.49
ZNF554-204ENST00000591265 DMBT1Q9UGM3 2413 aaPredicted RBP11.99□□□□□ -0.49
ZNF554-204ENST00000591265 DNAH10OSP0CZ25 163 aa11.99□□□□□ -0.49
ZNF554-204ENST00000591265 UBE2D3P61077 147 aa11.99□□□□□ -0.49
ZNF554-204ENST00000591265 UBE2D2P62837 147 aa11.99□□□□□ -0.49
ZNF554-204ENST00000591265 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
ZNF554-204ENST00000591265 NEXN-AS1Q8NBZ9 246 aa11.99□□□□□ -0.49
ZNF554-204ENST00000591265 TNFRSF18Q9Y5U5 241 aa11.99□□□□□ -0.49
ZNF554-204ENST00000591265 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
ZNF554-204ENST00000591265 PPP1R2P9O14990 202 aa11.98□□□□□ -0.49
ZNF554-204ENST00000591265 TMEM97Q5BJF2 176 aa11.98□□□□□ -0.49
ZNF554-204ENST00000591265 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
ZNF554-204ENST00000591265 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
ZNF554-204ENST00000591265 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
ZNF554-204ENST00000591265 Q9UF83 564 aa11.98□□□□□ -0.49
ZNF554-204ENST00000591265 M0QY20 66 aa11.97□□□□□ -0.49
ZNF554-204ENST00000591265 GCSHP23434 173 aa11.97□□□□□ -0.49
ZNF554-204ENST00000591265 RIGQ13278 110 aa11.97□□□□□ -0.49
ZNF554-204ENST00000591265 LINC01556Q5JQF7 62 aa11.97□□□□□ -0.49
ZNF554-204ENST00000591265 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
ZNF554-204ENST00000591265 SMIM27A0A1W2PRY6 76 aa11.96□□□□□ -0.49
ZNF554-204ENST00000591265 FAM229AH3BQW9 127 aa11.96□□□□□ -0.49
ZNF554-204ENST00000591265 RASL11AQ6T310 242 aa11.96□□□□□ -0.49
ZNF554-204ENST00000591265 NUP35Q8NFH5 326 aa11.96□□□□□ -0.49
ZNF554-204ENST00000591265 MYCBP2O75592 4640 aa11.96□□□□□ -0.5
ZNF554-204ENST00000591265 A0A1B0GW15 77 aa11.95□□□□□ -0.5
ZNF554-204ENST00000591265 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
ZNF554-204ENST00000591265 MT-ND4LP03901 98 aa11.94□□□□□ -0.5
ZNF554-204ENST00000591265 COMMD7Q86VX2 200 aa11.94□□□□□ -0.5
ZNF554-204ENST00000591265 ANAPC16Q96DE5 110 aa11.94□□□□□ -0.5
ZNF554-204ENST00000591265 TMEM191AQ9H0A3 160 aa11.94□□□□□ -0.5
ZNF554-204ENST00000591265 NIT2Q9NQR4 276 aa11.94□□□□□ -0.5
ZNF554-204ENST00000591265 TMEM218A2RU14 115 aa11.93□□□□□ -0.5
ZNF554-204ENST00000591265 SMR3BP02814 79 aaPredicted RBP11.93□□□□□ -0.5
ZNF554-204ENST00000591265 PKIAP61925 76 aa11.93□□□□□ -0.5
ZNF554-204ENST00000591265 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
ZNF554-204ENST00000591265 LINC00862A6NCI5 91 aa11.92□□□□□ -0.5
ZNF554-204ENST00000591265 S100A8P05109 93 aa11.92□□□□□ -0.5
ZNF554-204ENST00000591265 TMEM70Q9BUB7 260 aa11.92□□□□□ -0.5
ZNF554-204ENST00000591265 CHCHD7Q9BUK0 85 aa11.92□□□□□ -0.5
ZNF554-204ENST00000591265 URGCP-MRPS24S4R325 110 aa11.92□□□□□ -0.5
ZNF554-204ENST00000591265 TRBV6-8A0A0A6YYG3 113 aa11.91□□□□□ -0.5
ZNF554-204ENST00000591265 F8W036 122 aa11.91□□□□□ -0.5
ZNF554-204ENST00000591265 SEC11CQ9BY50 192 aa11.91□□□□□ -0.5
ZNF554-204ENST00000591265 GATD1Q8NB37 220 aa11.9□□□□□ -0.5
ZNF554-204ENST00000591265 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
ZNF554-204ENST00000591265 MRAP2Q96G30 205 aa11.89□□□□□ -0.51
ZNF554-204ENST00000591265 TRBV25-1A0A075B6N4 114 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 A0A087WX48 190 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 PPP1R17O96001 155 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 LAGE3Q14657 143 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 ATP5L2Q7Z4Y8 100 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 NIT1Q86X76 327 aa11.88□□□□□ -0.51
ZNF554-204ENST00000591265 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
ZNF554-204ENST00000591265 IGLV5-52A0A0A0MRZ9 124 aa11.87□□□□□ -0.51
ZNF554-204ENST00000591265 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms