RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 FAM231CP0DMU5 169 aa12.55□□□□□ -0.4
SAFB-207ENST00000589863 PTH2Q96A98 100 aa12.55□□□□□ -0.4
SAFB-207ENST00000589863 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
SAFB-207ENST00000589863 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
SAFB-207ENST00000589863 NDUFS8O00217 210 aa12.55□□□□□ -0.4
SAFB-207ENST00000589863 ZNF418Q8TF45 676 aaPredicted RBP12.55□□□□□ -0.4
SAFB-207ENST00000589863 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
SAFB-207ENST00000589863 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 NDUFA11Q86Y39 141 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 AMELXQ99217 191 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 PTPN13Q12923 2485 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 TLN2Q9Y4G6 2542 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 SNRPD3P62318 126 aaKnown RBP12.54□□□□□ -0.4
SAFB-207ENST00000589863 SIGMAR1Q99720 223 aa12.54□□□□□ -0.4
SAFB-207ENST00000589863 IGHV1OR15-1A0A075B7D0 117 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 K7EQG2 157 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 B4DSR2 109 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 J3QQQ9 107 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 IGHV3-30P01768 117 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 CFC1BP0CG36 223 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 CFC1P0CG37 223 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 IGHV3-30-5P0DP03 117 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 PAPPA-AS1Q5QFB9 102 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
SAFB-207ENST00000589863 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
SAFB-207ENST00000589863 ZNF469Q96JG9 3925 aaPredicted RBP12.53□□□□□ -0.4
SAFB-207ENST00000589863 J3QR89 54 aa12.52□□□□□ -0.41
SAFB-207ENST00000589863 PROK1P58294 105 aa12.52□□□□□ -0.41
SAFB-207ENST00000589863 RBMY1A1P0DJD3 496 aaKnown RBP12.52□□□□□ -0.41
SAFB-207ENST00000589863 RBMY1CP0DJD4 496 aa12.52□□□□□ -0.41
SAFB-207ENST00000589863 RBMY1FQ15415 496 aaKnown RBP12.52□□□□□ -0.41
SAFB-207ENST00000589863 NFE4Q86UQ8 179 aa12.52□□□□□ -0.41
SAFB-207ENST00000589863 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
SAFB-207ENST00000589863 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.41
SAFB-207ENST00000589863 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
SAFB-207ENST00000589863 Q9UF83 564 aa12.51□□□□□ -0.41
SAFB-207ENST00000589863 UBE2D3P61077 147 aa12.51□□□□□ -0.41
SAFB-207ENST00000589863 UBE2D2P62837 147 aa12.51□□□□□ -0.41
SAFB-207ENST00000589863 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
SAFB-207ENST00000589863 A0A0J9YXV3 536 aa12.5□□□□□ -0.41
SAFB-207ENST00000589863 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
SAFB-207ENST00000589863 TCL1BO95988 128 aa12.5□□□□□ -0.41
SAFB-207ENST00000589863 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
SAFB-207ENST00000589863 KNCNA6PVL3 124 aa12.49□□□□□ -0.41
SAFB-207ENST00000589863 HIST2H2BDQ6DRA6 164 aa12.49□□□□□ -0.41
SAFB-207ENST00000589863 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
SAFB-207ENST00000589863 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
SAFB-207ENST00000589863 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
SAFB-207ENST00000589863 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
SAFB-207ENST00000589863 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
SAFB-207ENST00000589863 C20orf203Q8NBC4 194 aa12.49□□□□□ -0.41
SAFB-207ENST00000589863 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
SAFB-207ENST00000589863 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
SAFB-207ENST00000589863 EIF4EBP3O60516 100 aaPredicted RBP12.48□□□□□ -0.41
SAFB-207ENST00000589863 HOXD3P31249 432 aaPredicted RBP12.48□□□□□ -0.41
SAFB-207ENST00000589863 FOXI1Q12951 378 aa12.48□□□□□ -0.41
SAFB-207ENST00000589863 NSUN5P1Q3KNT7 163 aa12.48□□□□□ -0.41
SAFB-207ENST00000589863 C18orf65Q6ZTR6 163 aa12.48□□□□□ -0.41
SAFB-207ENST00000589863 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
SAFB-207ENST00000589863 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
SAFB-207ENST00000589863 H7C2G1 150 aa12.47□□□□□ -0.41
SAFB-207ENST00000589863 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
SAFB-207ENST00000589863 IGLV4-3A0A075B6K6 122 aa12.47□□□□□ -0.41
SAFB-207ENST00000589863 TRAV2A0A0B4J234 112 aa12.47□□□□□ -0.41
SAFB-207ENST00000589863 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
SAFB-207ENST00000589863 A4D1N5 150 aa12.47□□□□□ -0.41
SAFB-207ENST00000589863 C1QTNF4Q9BXJ3 329 aa12.47□□□□□ -0.41
SAFB-207ENST00000589863 I3L3M4 83 aa12.46□□□□□ -0.41
SAFB-207ENST00000589863 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
SAFB-207ENST00000589863 FHL3Q13643 280 aa12.46□□□□□ -0.41
SAFB-207ENST00000589863 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.42
SAFB-207ENST00000589863 RHOHQ15669 191 aa12.46□□□□□ -0.42
SAFB-207ENST00000589863 RHODO00212 210 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 SPXQ9BT56 116 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 VCX2Q9H322 139 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
SAFB-207ENST00000589863 SETD2Q9BYW2 2564 aaPredicted RBP12.45□□□□□ -0.42
SAFB-207ENST00000589863 SCGB1C2P0DMR2 95 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 TCTEX1D4Q5JR98 221 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 PRO1854Q9UHT4 67 aa12.45□□□□□ -0.42
SAFB-207ENST00000589863 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 CHD6Q8TD26 2715 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 SLURP1P55000 103 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 CFAP161Q6P656 301 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 FAM104AQ969W3 186 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 DEFB131AP59861 70 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 CARD19Q96LW7 228 aa12.44□□□□□ -0.42
SAFB-207ENST00000589863 BEX4Q9NWD9 120 aaPredicted RBP12.44□□□□□ -0.42
SAFB-207ENST00000589863 C2CD3Q4AC94 2353 aa12.43□□□□□ -0.42
SAFB-207ENST00000589863 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
SAFB-207ENST00000589863 TRAV8-3A0A0A6YYJ7 113 aa12.43□□□□□ -0.42
SAFB-207ENST00000589863 LEPROTO15243 131 aa12.43□□□□□ -0.42
SAFB-207ENST00000589863 MUSTN1Q8IVN3 82 aa12.43□□□□□ -0.42
SAFB-207ENST00000589863 NF1P21359 2839 aa12.43□□□□□ -0.42
SAFB-207ENST00000589863 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
SAFB-207ENST00000589863 Q6ZSN1 163 aa12.42□□□□□ -0.42
SAFB-207ENST00000589863 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms