RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 ZNF479Q96JC4 524 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 TMEM70Q9BUB7 260 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 NIT2Q9NQR4 276 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 TRGV2A0A075B6R0 118 aa8.14□□□□□ -1.11
SMAD4-205ENST00000588745 IGHV4-28A0A0C4DH34 117 aa8.14□□□□□ -1.11
SMAD4-205ENST00000588745 SDHAF1A6NFY7 115 aa8.14□□□□□ -1.11
SMAD4-205ENST00000588745 K7EMI3 77 aa8.14□□□□□ -1.11
SMAD4-205ENST00000588745 MIFP14174 115 aa8.14□□□□□ -1.11
SMAD4-205ENST00000588745 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
SMAD4-205ENST00000588745 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-205ENST00000588745 Q6ZSN1 163 aa8.14□□□□□ -1.11
SMAD4-205ENST00000588745 TCAPO15273 167 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 CIDEAO60543 219 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 FCER1GP30273 86 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 KRTDAPP60985 99 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 LAGE3Q14657 143 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 KPRPQ5T749 579 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-205ENST00000588745 NEGR1Q7Z3B1 354 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 Q8NAQ8 132 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 HSPB8Q9UJY1 196 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 TP53TG1Q9Y2A0 90 aa8.13□□□□□ -1.11
SMAD4-205ENST00000588745 TRBV27A0A0K0K1C4 114 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 VCYO14598 125 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 P0DMU3 169 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 FAM231AP0DMU4 169 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 FAM231CP0DMU5 169 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 ORMDL2Q53FV1 153 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 NEXN-AS1Q8NBZ9 246 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 C12orf57Q99622 126 aa8.12□□□□□ -1.11
SMAD4-205ENST00000588745 K7EQD1 137 aa8.11□□□□□ -1.11
SMAD4-205ENST00000588745 RIPPLY3P57055 190 aa8.11□□□□□ -1.11
SMAD4-205ENST00000588745 FAM222AQ5U5X8 452 aa8.11□□□□□ -1.11
SMAD4-205ENST00000588745 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
SMAD4-205ENST00000588745 SCGB1D1O95968 90 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 NUDT3O95989 172 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 DEFB130BP0DP73 79 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 DEFB130AP0DP74 79 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 BTF3P20290 206 aaKnown RBP8.1□□□□□ -1.11
SMAD4-205ENST00000588745 DKK2Q9UBU2 259 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 TNFRSF18Q9Y5U5 241 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 I3L3M4 83 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 DEFB4AO15263 64 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 Q8N976 141 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 MAP1LC3CQ9BXW4 147 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 RETNQ9HD89 108 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 Q9UF83 564 aa8.1□□□□□ -1.11
SMAD4-205ENST00000588745 TRGV4A0A0C4DH28 118 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 SYS1-DBNDD2H3BUS1 97 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 K7EIL1 84 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 TSHBP01222 138 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 PRB2P02812 416 aaPredicted RBP8.09□□□□□ -1.12
SMAD4-205ENST00000588745 FHL2Q14192 279 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 RHOHQ15669 191 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 NOTCH1P46531 2555 aa8.09□□□□□ -1.12
SMAD4-205ENST00000588745 TEX48A0A1B0GUV7 120 aa8.08□□□□□ -1.12
SMAD4-205ENST00000588745 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
SMAD4-205ENST00000588745 PET117Q6UWS5 81 aa8.08□□□□□ -1.12
SMAD4-205ENST00000588745 C2orf66Q6UXQ4 117 aa8.08□□□□□ -1.12
SMAD4-205ENST00000588745 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
SMAD4-205ENST00000588745 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
SMAD4-205ENST00000588745 CELA1Q9UNI1 258 aa8.08□□□□□ -1.12
SMAD4-205ENST00000588745 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 NBEAL2Q6ZNJ1 2754 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 TRBV7-3A0A075B6L6 115 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 SPART-AS1P0CW21 52 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 G0S2P27469 103 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 DAD1P61803 113 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 SPATA12Q7Z6I5 190 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 IFI27L1Q96BM0 104 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
SMAD4-205ENST00000588745 C20orf202A1L168 122 aa8.06□□□□□ -1.12
SMAD4-205ENST00000588745 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
SMAD4-205ENST00000588745 ATP5LO75964 103 aa8.06□□□□□ -1.12
SMAD4-205ENST00000588745 UBE2D3P61077 147 aa8.06□□□□□ -1.12
SMAD4-205ENST00000588745 UBE2D2P62837 147 aa8.06□□□□□ -1.12
SMAD4-205ENST00000588745 DEFB104AQ8WTQ1 72 aa8.06□□□□□ -1.12
SMAD4-205ENST00000588745 C11orf68Q9H3H3 251 aaKnown RBP8.06□□□□□ -1.12
SMAD4-205ENST00000588745 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 GAGE12JA6NER3 117 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 H0Y8G0 127 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 GAGE1Q13065 139 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 GAGE4Q13068 117 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 GAGE5Q13069 117 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 COTL1Q14019 142 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 GAGE13Q4V321 117 aa8.05□□□□□ -1.12
SMAD4-205ENST00000588745 LINC01545Q5VT33 79 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms