RNA–Protein interactions for RNA: ENST00000588041.1

AC002546.1-201, humanhuman

BASIC

Gene AC002546.1, Length 2,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002546.1-201ENST00000588041 CHKB-CPT1BH3BT56 60 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 TMEM141Q96I45 108 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 KIDINS220Q9ULH0 1771 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 TARBP1Q13395 1621 aaKnown RBP2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 PREX2Q70Z35 1606 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 PEAK1Q9H792 1746 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 PTPRDP23468 1912 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 KDM3BQ7LBC6 1761 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 INTS1Q8N201 2190 aaKnown RBP2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 IGLV3-16A0A075B6K0 115 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 SDHAF1A6NFY7 115 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 PRB2P02812 416 aaPredicted RBP2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 CISD3P0C7P0 127 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 KPRPQ5T749 579 aaPredicted RBP2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 C9orf163Q8N9P6 203 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 UBALD1Q8TB05 177 aa2.1□□□□□ -2.07
AC002546.1-201ENST00000588041 MED13LQ71F56 2210 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 SORL1Q92673 2214 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 ABCC3O15438 1527 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 DIP2AQ14689 1571 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 PTPRMP28827 1452 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 IQSEC2Q5JU85 1478 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 A0A1B0GU33 70 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 CLPSL1A2RUU4 121 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 GCHFRP30047 84 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 Q1T7F1 81 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 C9orf116Q5BN46 136 aaPredicted RBP2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 IFI27L1Q96BM0 104 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 TRGV9Q99603 122 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 S4R3C0 116 aa2.09□□□□□ -2.07
AC002546.1-201ENST00000588041 CPAMD8Q8IZJ3 1885 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 PCSK5Q92824 1860 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 GOLGA4Q13439 2230 aaKnown RBP2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 MRPS21P82921 87 aaKnown RBP2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 C10orf128Q5T292 105 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 C12orf73Q69YU5 71 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 SLC48A1Q6P1K1 146 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 LINC00467Q9BRT7 94 aa2.09□□□□□ -2.08
AC002546.1-201ENST00000588041 COL4A6Q14031 1691 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 SUPT6HQ7KZ85 1726 aaKnown RBP2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 PPLO60437 1756 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 PLXNC1O60486 1568 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 ABCA8O94911 1581 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 IGKV3D-7A0A0C4DH55 119 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 TCRBV4S1A1TA0A5B7 111 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 ZNF815PA8K554 130 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 SPANXN1Q5VSR9 72 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 Q8N6K4 173 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 MGST2Q99735 147 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 MRPL35Q9NZE8 188 aaKnown RBP2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 BLMP54132 1417 aaPredicted RBP2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 ZNF826PQ6ZT77 177 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 R4GN34 69 aa2.08□□□□□ -2.08
AC002546.1-201ENST00000588041 ARFGEF2Q9Y6D5 1785 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 SIP14410 1827 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 ANKARQ7Z5J8 1434 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 RNF17Q9BXT8 1623 aaKnown RBP2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 RTTNQ86VV8 2226 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 RGPD4Q7Z3J3 1758 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 IGHV3OR16-8A0A075B7F1 116 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 TOMM5Q8N4H5 51 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 MYOZ3Q8TDC0 251 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 PPP1R1CQ8WVI7 109 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 C14orf132Q9NPU4 83 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 ALPK2Q86TB3 2170 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 NCOA2Q15596 1464 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 LRP5O75197 1615 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 IGLV4-69A0A075B6H9 119 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 TRAV10A0A0B4J240 114 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 ASB16-AS1Q495Z4 193 aa2.07□□□□□ -2.08
AC002546.1-201ENST00000588041 PXDNLA1KZ92 1463 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 IQGAP2Q13576 1575 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 KIF14Q15058 1648 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 ABCA9Q8IUA7 1624 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 USP54Q70EL1 1684 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 XRN1Q8IZH2 1706 aaKnown RBP2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 KIAA1549LQ6ZVL6 1849 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 GBF1Q92538 1859 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 BRWD1Q9NSI6 2320 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 RGPD3A6NKT7 1758 aaPredicted RBP2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 HMGXB3Q12766 1538 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 C9orf106Q8NAJ2 232 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 TMEM254Q8TBM7 123 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 GFRA4Q9GZZ7 299 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 SETBP1Q9Y6X0 1596 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 ADGRL1O94910 1474 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 SSBP1Q04837 148 aaKnown RBP2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 LPAL2Q16609 132 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 WFDC9Q8NEX5 89 aa2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 TIMM8BQ9Y5J9 83 aaPredicted RBP2.06□□□□□ -2.08
AC002546.1-201ENST00000588041 MYO16Q9Y6X6 1858 aa2.05□□□□□ -2.08
AC002546.1-201ENST00000588041 CROCC2H7BZ55 1655 aa2.05□□□□□ -2.08
AC002546.1-201ENST00000588041 EFCAB5A4FU69 1503 aa2.05□□□□□ -2.08
AC002546.1-201ENST00000588041 MED12Q93074 2177 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms