RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
SMARCD2-207ENST00000578234 NTN5Q8WTR8 489 aaPredicted RBP8.43□□□□□ -1.06
SMARCD2-207ENST00000578234 SFRP2Q96HF1 295 aa8.43□□□□□ -1.06
SMARCD2-207ENST00000578234 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
SMARCD2-207ENST00000578234 TRAV8-6A0A0B4J262 113 aa8.42□□□□□ -1.06
SMARCD2-207ENST00000578234 IBA57-AS1B1ANH7 110 aa8.42□□□□□ -1.06
SMARCD2-207ENST00000578234 ISOC2Q96AB3 205 aa8.42□□□□□ -1.06
SMARCD2-207ENST00000578234 TRBV6-4A0A1B0GX49 114 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 COMMD7Q86VX2 200 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 C14orf178Q8N769 122 aaPredicted RBP8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 GTSF1Q8WW33 167 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 OSTCQ9NRP0 149 aa8.41□□□□□ -1.06
SMARCD2-207ENST00000578234 A8MWL6 223 aa8.4□□□□□ -1.06
SMARCD2-207ENST00000578234 CACNG7P62955 275 aa8.4□□□□□ -1.06
SMARCD2-207ENST00000578234 UFSP1Q6NVU6 142 aa8.4□□□□□ -1.06
SMARCD2-207ENST00000578234 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
SMARCD2-207ENST00000578234 PGLYRP4Q96LB8 373 aa8.4□□□□□ -1.06
SMARCD2-207ENST00000578234 PRADC1Q9BSG0 188 aa8.4□□□□□ -1.06
SMARCD2-207ENST00000578234 F2Z2F3 143 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 RHODO00212 210 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 NTF3P20783 257 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 RHOHQ15669 191 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 ZNF56Q15929 161 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 LELP1Q5T871 98 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 ZFP2Q6ZN57 461 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 Q8N814 137 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 V9GYV3 84 aa8.39□□□□□ -1.07
SMARCD2-207ENST00000578234 FAT1Q14517 4588 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 GAGE12JA6NER3 117 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 F5H697 171 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 MGPP08493 103 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 CTRLP40313 264 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 GAGE1Q13065 139 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 GAGE4Q13068 117 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 GAGE5Q13069 117 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 LAGE3Q14657 143 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 TWIST1Q15672 202 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 CT83Q5H943 113 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 AP1S3Q96PC3 154 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 Q9UF83 564 aa8.38□□□□□ -1.07
SMARCD2-207ENST00000578234 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
SMARCD2-207ENST00000578234 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
SMARCD2-207ENST00000578234 TSKUQ8WUA8 353 aa8.37□□□□□ -1.07
SMARCD2-207ENST00000578234 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
SMARCD2-207ENST00000578234 TMEM218A2RU14 115 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 LINC00862A6NCI5 91 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 F8W036 122 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 LECT2O14960 151 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 TRGC1P0CF51 173 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 ADCYAP1P18509 176 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
SMARCD2-207ENST00000578234 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 PLA2G1BP04054 148 aaKnown RBP8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 RAB4BP61018 213 aa8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 TM2D2Q9BX73 214 aa8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
SMARCD2-207ENST00000578234 WDR73Q6P4I2 378 aa8.34□□□□□ -1.07
SMARCD2-207ENST00000578234 NUP35Q8NFH5 326 aa8.34□□□□□ -1.07
SMARCD2-207ENST00000578234 GFRA4Q9GZZ7 299 aa8.34□□□□□ -1.07
SMARCD2-207ENST00000578234 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
SMARCD2-207ENST00000578234 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
SMARCD2-207ENST00000578234 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
SMARCD2-207ENST00000578234 CNFNQ9BYD5 112 aa8.33□□□□□ -1.08
SMARCD2-207ENST00000578234 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
SMARCD2-207ENST00000578234 A0A1B0GUT8 65 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 Q6ZSA8 131 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 SMIM15Q7Z3B0 74 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 NEXN-AS1Q8NBZ9 246 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 NAT8BQ9UHF3 227 aa8.32□□□□□ -1.08
SMARCD2-207ENST00000578234 A0A087WWC5 75 aa8.31□□□□□ -1.08
SMARCD2-207ENST00000578234 FAM231BA6NCW3 169 aa8.31□□□□□ -1.08
SMARCD2-207ENST00000578234 RIGQ13278 110 aa8.31□□□□□ -1.08
SMARCD2-207ENST00000578234 WFDC2Q14508 124 aa8.31□□□□□ -1.08
SMARCD2-207ENST00000578234 LINC01620Q4KN68 170 aa8.31□□□□□ -1.08
SMARCD2-207ENST00000578234 TRBV7-3A0A075B6L6 115 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 TRAV26-2A0A0B4J265 109 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 TRBV10-1A0A0K0K1A3 114 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 PPP1R2P9O14990 202 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 MT-ND4LP03901 98 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 MRPL54Q6P161 138 aaKnown RBP8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 Q8N3U1 123 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
SMARCD2-207ENST00000578234 SEC11CQ9BY50 192 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms