RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 RS1O15537 224 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 GYPEP15421 78 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 LOXL1Q08397 574 aaPredicted RBP8.2□□□□□ -1.1
SEC22B-201ENST00000578049 DAZAP2Q15038 168 aaPredicted RBP8.2□□□□□ -1.1
SEC22B-201ENST00000578049 LINC00322Q6ZN03 302 aaPredicted RBP8.2□□□□□ -1.1
SEC22B-201ENST00000578049 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 Q96MF0 132 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 MIR7-3HGQ8N6C7 128 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 C3orf56Q8N813 242 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 CLEC2BQ92478 149 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 H7C423 109 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 PTH2Q96A98 100 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 SIRPDQ9H106 197 aa8.19□□□□□ -1.1
SEC22B-201ENST00000578049 C10orf105Q8TEF2 133 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 TNCP24821 2201 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 A0A0J9YY99 117 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 RNF183Q96D59 192 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 TIMM17BO60830 172 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 OBSL1O75147 1896 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 IGHV4-61A0A0C4DH41 118 aa8.18□□□□□ -1.1
SEC22B-201ENST00000578049 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
SEC22B-201ENST00000578049 C9orf66Q5T8R8 295 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 TMEM263Q8WUH6 116 aaKnown RBP8.17□□□□□ -1.1
SEC22B-201ENST00000578049 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 SPRY2O43597 315 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 BLCAPP62952 87 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 CITED2Q99967 270 aaPredicted RBP8.17□□□□□ -1.1
SEC22B-201ENST00000578049 SPG11Q96JI7 2443 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 TTC28Q96AY4 2481 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 IGKV2D-24A0A075B6R9 120 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 FAM222AQ5U5X8 452 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 SEM1Q6ZVN7 128 aa8.17□□□□□ -1.1
SEC22B-201ENST00000578049 TRBV6-5A0A0K0K1A5 114 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 CLPSL2Q6UWE3 100 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 PYGO1Q9Y3Y4 419 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 MT-ATP8P03928 68 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 TIRAPP58753 221 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 UBE2BP63146 152 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 EBI3Q14213 229 aa8.16□□□□□ -1.1
SEC22B-201ENST00000578049 NFE4Q86UQ8 179 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 ZNF106Q9H2Y7 1883 aaKnown RBP8.15□□□□□ -1.1
SEC22B-201ENST00000578049 IGF1P05019 195 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 SLURP1P55000 103 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 DAND5Q8N907 189 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 IGHV3-33P01772 117 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.1
SEC22B-201ENST00000578049 ATP5EP56381 51 aaPredicted RBP8.15□□□□□ -1.1
SEC22B-201ENST00000578049 DYSFO75923 2080 aa8.15□□□□□ -1.1
SEC22B-201ENST00000578049 TMEM223A0PJW6 202 aa8.15□□□□□ -1.11
SEC22B-201ENST00000578049 MSMPQ1L6U9 139 aa8.15□□□□□ -1.11
SEC22B-201ENST00000578049 Q6ZQT7 251 aa8.15□□□□□ -1.11
SEC22B-201ENST00000578049 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.11
SEC22B-201ENST00000578049 IBA57-AS1B1ANH7 110 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 IGHV4-38-2P0DP08 117 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 HHLA3Q9XRX5 114 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 A0A087WW49 117 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 A6NDX4 124 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 TRBV12-3P01733 135 aa8.14□□□□□ -1.11
SEC22B-201ENST00000578049 CACNA1AO00555 2505 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 A0A096LPF7 62 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 WFDC9Q8NEX5 89 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 NDUFC1O43677 76 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 C2orf91Q6ZV80 131 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 C4orf3Q8WVX3 66 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 COX7BP24311 80 aa8.13□□□□□ -1.11
SEC22B-201ENST00000578049 INSL3P51460 131 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 Q6Q795 121 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 IGHV4-4A0A075B6R2 117 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 CFAP126Q5VTH2 177 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
SEC22B-201ENST00000578049 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 TEX49A0A1B0GTD5 131 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 K7EQG2 157 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 GRNP28799 593 aaKnown RBP8.12□□□□□ -1.11
SEC22B-201ENST00000578049 CNFNQ9BYD5 112 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 UNQ9165/PRO28630Q6UXU0 137 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 C14orf132Q9NPU4 83 aa8.12□□□□□ -1.11
SEC22B-201ENST00000578049 MAPK1IP1LQ8NDC0 245 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 DEFB136Q30KP8 78 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 FAM236DA0A1B0GTK5 79 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 FAM236CP0DP71 79 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 ZFP36P26651 326 aaKnown RBP8.11□□□□□ -1.11
SEC22B-201ENST00000578049 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
SEC22B-201ENST00000578049 IGHV4-30-2A0A087WSY4 118 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms